BLASTX nr result

ID: Atractylodes22_contig00029827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029827
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514972.1| Signal recognition particle subunit srp72, p...   100   2e-19
ref|XP_004135297.1| PREDICTED: signal recognition particle 72 kD...    96   2e-18
emb|CBI27541.3| unnamed protein product [Vitis vinifera]               93   3e-17
ref|XP_002271378.1| PREDICTED: signal recognition particle 72 kD...    93   3e-17
emb|CAN63819.1| hypothetical protein VITISV_028102 [Vitis vinifera]    93   3e-17

>ref|XP_002514972.1| Signal recognition particle subunit srp72, putative [Ricinus
           communis] gi|223546023|gb|EEF47526.1| Signal recognition
           particle subunit srp72, putative [Ricinus communis]
          Length = 664

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/67 (76%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
 Frame = -2

Query: 200 KPKPSA-TPVVSIEDLFTTLDRHIQRLEYEQAVKVADQVLSVAPGDEDAIRCKIVSLIKA 24
           K  PSA  P  +IEDLFTTL++HIQR +YEQAVKVADQVL+VAPGDEDAIRCK+V +IKA
Sbjct: 10  KAAPSAWQPPPAIEDLFTTLNKHIQRSDYEQAVKVADQVLAVAPGDEDAIRCKVVGMIKA 69

Query: 23  DRIDDAL 3
           D IDDAL
Sbjct: 70  DNIDDAL 76


>ref|XP_004135297.1| PREDICTED: signal recognition particle 72 kDa protein-like [Cucumis
           sativus] gi|449530207|ref|XP_004172087.1| PREDICTED:
           signal recognition particle 72 kDa protein-like [Cucumis
           sativus]
          Length = 667

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/66 (71%), Positives = 56/66 (84%)
 Frame = -2

Query: 200 KPKPSATPVVSIEDLFTTLDRHIQRLEYEQAVKVADQVLSVAPGDEDAIRCKIVSLIKAD 21
           K  PS+ P   IED FT+L+RHIQR E+ QAVKVADQ+LSVAPGDEDA+RCKIV+LIK D
Sbjct: 10  KASPSSQPPPPIEDQFTSLNRHIQRSEFSQAVKVADQILSVAPGDEDALRCKIVALIKDD 69

Query: 20  RIDDAL 3
           +ID+AL
Sbjct: 70  KIDNAL 75


>emb|CBI27541.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 47/70 (67%), Positives = 58/70 (82%), Gaps = 4/70 (5%)
 Frame = -2

Query: 200 KPKPSAT----PVVSIEDLFTTLDRHIQRLEYEQAVKVADQVLSVAPGDEDAIRCKIVSL 33
           KPKP+A+    P   IEDLFT+L+ HIQR +++QAVKVADQ+L VAP DEDAIRCK+V+L
Sbjct: 6   KPKPTASSSSQPPPPIEDLFTSLNLHIQRSQFDQAVKVADQILLVAPSDEDAIRCKVVAL 65

Query: 32  IKADRIDDAL 3
           IK DRI+DAL
Sbjct: 66  IKEDRINDAL 75


>ref|XP_002271378.1| PREDICTED: signal recognition particle 72 kDa protein [Vitis
           vinifera]
          Length = 673

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 47/70 (67%), Positives = 58/70 (82%), Gaps = 4/70 (5%)
 Frame = -2

Query: 200 KPKPSAT----PVVSIEDLFTTLDRHIQRLEYEQAVKVADQVLSVAPGDEDAIRCKIVSL 33
           KPKP+A+    P   IEDLFT+L+ HIQR +++QAVKVADQ+L VAP DEDAIRCK+V+L
Sbjct: 6   KPKPTASSSSQPPPPIEDLFTSLNLHIQRSQFDQAVKVADQILLVAPSDEDAIRCKVVAL 65

Query: 32  IKADRIDDAL 3
           IK DRI+DAL
Sbjct: 66  IKEDRINDAL 75


>emb|CAN63819.1| hypothetical protein VITISV_028102 [Vitis vinifera]
          Length = 1085

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 47/70 (67%), Positives = 58/70 (82%), Gaps = 4/70 (5%)
 Frame = -2

Query: 200 KPKPSAT----PVVSIEDLFTTLDRHIQRLEYEQAVKVADQVLSVAPGDEDAIRCKIVSL 33
           KPKP+A+    P   IEDLFT+L+ HIQR +++QAVKVADQ+L VAP DEDAIRCK+V+L
Sbjct: 428 KPKPTASSSSQPPPPIEDLFTSLNLHIQRSQFDQAVKVADQILLVAPSDEDAIRCKVVAL 487

Query: 32  IKADRIDDAL 3
           IK DRI+DAL
Sbjct: 488 IKEDRINDAL 497


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