BLASTX nr result

ID: Atractylodes22_contig00029798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029798
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P83218.1|PME_DAUCA RecName: Full=Pectinesterase; Short=PE; Al...   176   2e-42
pdb|1GQ8|A Chain A, Pectin Methylesterase From Carrot                 176   2e-42
ref|XP_002273499.2| PREDICTED: uncharacterized protein LOC100257...   172   3e-41
emb|CBI27741.3| unnamed protein product [Vitis vinifera]              172   3e-41
gb|AAR03544.1| pectin methylesterase isoform 1 [Fragaria x anana...   167   8e-40

>sp|P83218.1|PME_DAUCA RecName: Full=Pectinesterase; Short=PE; AltName: Full=Pectin
           methylesterase
          Length = 319

 Score =  176 bits (446), Expect = 2e-42
 Identities = 79/94 (84%), Positives = 87/94 (92%)
 Frame = -3

Query: 287 SFPTYLGRPWREYSRTVVMQSEISNVINPAGWFPWNENFALDTLYYGEYQNTGAGADTSN 108
           SFPTYLGRPW+EYSRTVVMQS I+NVINPAGWFPW+ NFALDTLYYGEYQNTGAGA TS 
Sbjct: 218 SFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSG 277

Query: 107 RVTWRGYRVITSATEAQGFTAGNFIGGGSWLSAT 6
           RVTW+G++VITS+TEAQGFT G+FI GGSWL AT
Sbjct: 278 RVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKAT 311


>pdb|1GQ8|A Chain A, Pectin Methylesterase From Carrot
          Length = 319

 Score =  176 bits (446), Expect = 2e-42
 Identities = 79/94 (84%), Positives = 87/94 (92%)
 Frame = -3

Query: 287 SFPTYLGRPWREYSRTVVMQSEISNVINPAGWFPWNENFALDTLYYGEYQNTGAGADTSN 108
           SFPTYLGRPW+EYSRTVVMQS I+NVINPAGWFPW+ NFALDTLYYGEYQNTGAGA TS 
Sbjct: 218 SFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSG 277

Query: 107 RVTWRGYRVITSATEAQGFTAGNFIGGGSWLSAT 6
           RVTW+G++VITS+TEAQGFT G+FI GGSWL AT
Sbjct: 278 RVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKAT 311


>ref|XP_002273499.2| PREDICTED: uncharacterized protein LOC100257766 [Vitis vinifera]
          Length = 1456

 Score =  172 bits (436), Expect = 3e-41
 Identities = 76/95 (80%), Positives = 87/95 (91%)
 Frame = -3

Query: 287 SFPTYLGRPWREYSRTVVMQSEISNVINPAGWFPWNENFALDTLYYGEYQNTGAGADTSN 108
           SFPTYLGRPW+EYSRTVVMQ+ IS+VINPAGW+PWN NFALDTL+Y EYQNTGAGADTS 
Sbjct: 135 SFPTYLGRPWKEYSRTVVMQTSISDVINPAGWYPWNGNFALDTLFYAEYQNTGAGADTSK 194

Query: 107 RVTWRGYRVITSATEAQGFTAGNFIGGGSWLSATG 3
           RV W+G++VITSA+EAQ FTAG+FIGG SWL +TG
Sbjct: 195 RVNWKGFKVITSASEAQAFTAGSFIGGSSWLPSTG 229



 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/95 (53%), Positives = 64/95 (67%)
 Frame = -3

Query: 290  GSFPTYLGRPWREYSRTVVMQSEISNVINPAGWFPWNENFALDTLYYGEYQNTGAGADTS 111
            GS  +YLGRPW+ Y+RTV ++S I + I+P+GW  WN N  LDTLYYGEY N G G+ T 
Sbjct: 743  GSVKSYLGRPWKVYARTVYLESYIDDFIDPSGWTEWNGNEGLDTLYYGEYDNNGPGSGTE 802

Query: 110  NRVTWRGYRVITSATEAQGFTAGNFIGGGSWLSAT 6
            NRVTW+GY V+    +A  FT   FI G  WL +T
Sbjct: 803  NRVTWQGYHVMED-NDAYNFTVSEFITGDEWLDST 836



 Score =  112 bits (280), Expect = 3e-23
 Identities = 52/90 (57%), Positives = 61/90 (67%)
 Frame = -3

Query: 278  TYLGRPWREYSRTVVMQSEISNVINPAGWFPWNENFALDTLYYGEYQNTGAGADTSNRVT 99
            +YLGRPW+E+SRT+VM+S I ++I P GW PW  NFAL TLYY EY N G GA  S RV 
Sbjct: 1355 SYLGRPWKEFSRTIVMESTIEDLIQPQGWLPWEGNFALSTLYYAEYNNKGPGAALSARVK 1414

Query: 98   WRGYRVITSATEAQGFTAGNFIGGGSWLSA 9
            W GY+VI    EA  +T G FI G  WL A
Sbjct: 1415 WPGYKVI-EKEEAVKYTVGPFIQGDDWLKA 1443


>emb|CBI27741.3| unnamed protein product [Vitis vinifera]
          Length = 366

 Score =  172 bits (436), Expect = 3e-41
 Identities = 76/95 (80%), Positives = 87/95 (91%)
 Frame = -3

Query: 287 SFPTYLGRPWREYSRTVVMQSEISNVINPAGWFPWNENFALDTLYYGEYQNTGAGADTSN 108
           SFPTYLGRPW+EYSRTVVMQ+ IS+VINPAGW+PWN NFALDTL+Y EYQNTGAGADTS 
Sbjct: 265 SFPTYLGRPWKEYSRTVVMQTSISDVINPAGWYPWNGNFALDTLFYAEYQNTGAGADTSK 324

Query: 107 RVTWRGYRVITSATEAQGFTAGNFIGGGSWLSATG 3
           RV W+G++VITSA+EAQ FTAG+FIGG SWL +TG
Sbjct: 325 RVNWKGFKVITSASEAQAFTAGSFIGGSSWLPSTG 359


>gb|AAR03544.1| pectin methylesterase isoform 1 [Fragaria x ananassa]
          Length = 224

 Score =  167 bits (423), Expect = 8e-40
 Identities = 74/96 (77%), Positives = 85/96 (88%)
 Frame = -3

Query: 290 GSFPTYLGRPWREYSRTVVMQSEISNVINPAGWFPWNENFALDTLYYGEYQNTGAGADTS 111
           GSF TYLGRPW+EYSRTV+MQS I+++I+PAGW+ W+  FALDTL+Y EY NTGAGA TS
Sbjct: 122 GSFKTYLGRPWKEYSRTVIMQSSITDIIDPAGWYEWSGTFALDTLFYAEYANTGAGASTS 181

Query: 110 NRVTWRGYRVITSATEAQGFTAGNFIGGGSWLSATG 3
           NRVTW+GY+VITSATEAQ FT GNFI GGSWLSATG
Sbjct: 182 NRVTWKGYKVITSATEAQAFTPGNFIAGGSWLSATG 217


Top