BLASTX nr result

ID: Atractylodes22_contig00029772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029772
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g...    65   6e-09
emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]    65   6e-09
gb|ACG47441.1| nucleic acid binding protein [Zea mays] gi|414870...    55   6e-06

>ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera] gi|296087281|emb|CBI33655.3| unnamed protein
           product [Vitis vinifera]
          Length = 676

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
 Frame = +3

Query: 45  DFEPQGYQVPPSATGYPG---AVDLKMPSSGRGSVIGPGVGNA---SEITGTRSKVQDLY 206
           ++EPQ Y VPP+ATGY     +++ K+P++   SVIG G GN    SE+ G R K+QD  
Sbjct: 525 EYEPQSYPVPPAATGYHNVNSSMESKIPNNSVSSVIGMGGGNVANMSEMAGARVKLQDPQ 584

Query: 207 GGGSESIAEVHGS 245
            GGSE + E+ GS
Sbjct: 585 SGGSECVVEIRGS 597


>emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
          Length = 668

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
 Frame = +3

Query: 45  DFEPQGYQVPPSATGYPG---AVDLKMPSSGRGSVIGPGVGNA---SEITGTRSKVQDLY 206
           ++EPQ Y VPP+ATGY     +++ K+P++   SVIG G GN    SE+ G R K+QD  
Sbjct: 553 EYEPQSYPVPPAATGYHNVNSSMESKIPNNSVSSVIGMGGGNVANMSEMAGARVKLQDPQ 612

Query: 207 GGGSESIAEVHGS 245
            GGSE + E+ GS
Sbjct: 613 SGGSECVVEIRGS 625


>gb|ACG47441.1| nucleic acid binding protein [Zea mays]
           gi|414870927|tpg|DAA49484.1| TPA: nucleic acid binding
           protein [Zea mays]
          Length = 769

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 11/86 (12%)
 Frame = +3

Query: 21  RGYNSPPTDFEP--------QGYQVPPSATGYPGAVDLKMPSSGRGSVIGPGVGNASEI- 173
           RG NS   D+          + Y+ P SATG+   ++L++P+S  GS++G G  N +EI 
Sbjct: 647 RGGNSDAYDYTEAAGQIHGREDYREPTSATGFLSTIELRIPNSSLGSIVGAGGVNLAEIR 706

Query: 174 --TGTRSKVQDLYGGGSESIAEVHGS 245
             +G R ++ + + G SES+ E+ G+
Sbjct: 707 QVSGARLRLHEAHAGSSESVVEIQGT 732


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