BLASTX nr result

ID: Atractylodes22_contig00029765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029765
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   142   4e-32
ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   140   1e-31
ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [...   140   1e-31
ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
ref|XP_004166446.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   132   3e-29

>ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3713

 Score =  142 bits (357), Expect = 4e-32
 Identities = 81/149 (54%), Positives = 88/149 (59%)
 Frame = -2

Query: 448  VAGSTDVDMNAADPEANENRDPLXXXXXXXXXXXXEQNTQVAQDNSQTDETGATNVAPNA 269
            +  S DVDM   D E N++  P              QNT+VA D +Q D+  A N A  A
Sbjct: 2555 IYASADVDMGGTDAEGNQSEQPTVSEDRRDEMLST-QNTEVAPDATQADQVSANNEASGA 2613

Query: 268  NGIDPTFLEALPEDLRAEVLASHQPQSTPAPALSPAVAEDIDPEFLAALPPDIXXXXXXX 89
            N IDPTFLEALPEDLRAEVLAS Q QS   PA +P  AEDIDPEFLAALPPDI       
Sbjct: 2614 NTIDPTFLEALPEDLRAEVLASQQAQSVQPPAYAPPSAEDIDPEFLAALPPDIQAEVLAQ 2673

Query: 88   XXXXXXXXXXXXQPVDMDNASIIATFPAD 2
                        QPVDMDNASIIATFPAD
Sbjct: 2674 QRAQRVAQQAEGQPVDMDNASIIATFPAD 2702


>ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3739

 Score =  140 bits (353), Expect = 1e-31
 Identities = 80/149 (53%), Positives = 88/149 (59%)
 Frame = -2

Query: 448  VAGSTDVDMNAADPEANENRDPLXXXXXXXXXXXXEQNTQVAQDNSQTDETGATNVAPNA 269
            +  S DVDM   D E N++  P              QNT+VA D +Q D+  A N A  A
Sbjct: 2581 IYASADVDMGGTDAEGNQSEQPTVFEDGRGEMLST-QNTEVAPDATQADQVSANNEASGA 2639

Query: 268  NGIDPTFLEALPEDLRAEVLASHQPQSTPAPALSPAVAEDIDPEFLAALPPDIXXXXXXX 89
            N IDPTFLEALPEDLRAEVLAS Q QS   PA +P  AEDIDPEFLAALPPDI       
Sbjct: 2640 NTIDPTFLEALPEDLRAEVLASQQAQSVQPPAYAPPSAEDIDPEFLAALPPDIQAEVLAQ 2699

Query: 88   XXXXXXXXXXXXQPVDMDNASIIATFPAD 2
                        QPVDMDNASIIATFPA+
Sbjct: 2700 QRAQMVAQQAEGQPVDMDNASIIATFPAE 2728


>ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
            gi|223538012|gb|EEF39625.1| E3 ubiquitin protein ligase
            upl2, putative [Ricinus communis]
          Length = 3691

 Score =  140 bits (352), Expect = 1e-31
 Identities = 76/146 (52%), Positives = 88/146 (60%)
 Frame = -2

Query: 439  STDVDMNAADPEANENRDPLXXXXXXXXXXXXEQNTQVAQDNSQTDETGATNVAPNANGI 260
            + DVDMN +D E +++  P+             Q T VAQ+ +QTD+  A N A  A+ I
Sbjct: 2538 NVDVDMNGSDAEGDQSEQPITAPEHGVDEPSSRQETLVAQEGNQTDQASANNEASGASAI 2597

Query: 259  DPTFLEALPEDLRAEVLASHQPQSTPAPALSPAVAEDIDPEFLAALPPDIXXXXXXXXXX 80
            DPTFLEALPEDLRAEVLAS Q QS   P  +P   +DIDPEFLAALPPDI          
Sbjct: 2598 DPTFLEALPEDLRAEVLASQQAQSVQPPNYTPPPVDDIDPEFLAALPPDIQAEVLAQQRA 2657

Query: 79   XXXXXXXXXQPVDMDNASIIATFPAD 2
                     QPVDMDNASIIATFPAD
Sbjct: 2658 QRIAQQAEGQPVDMDNASIIATFPAD 2683


>ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|222846131|gb|EEE83678.1|
            predicted protein [Populus trichocarpa]
          Length = 3728

 Score =  137 bits (344), Expect = 1e-30
 Identities = 76/146 (52%), Positives = 85/146 (58%)
 Frame = -2

Query: 439  STDVDMNAADPEANENRDPLXXXXXXXXXXXXEQNTQVAQDNSQTDETGATNVAPNANGI 260
            + DV+MN AD + N+                  Q T VA+D +Q D+TG  N AP  N I
Sbjct: 2573 NADVEMNGADADGNQLEQSTLASERGADEPSSRQETLVARDAAQADQTGLDNGAPATNAI 2632

Query: 259  DPTFLEALPEDLRAEVLASHQPQSTPAPALSPAVAEDIDPEFLAALPPDIXXXXXXXXXX 80
            DPTFLEALPEDLRAEVLAS Q QS   P  +P   +DIDPEFLAALPPDI          
Sbjct: 2633 DPTFLEALPEDLRAEVLASQQAQSVQPPTYAPPSVDDIDPEFLAALPPDIQAEVLAQQRA 2692

Query: 79   XXXXXXXXXQPVDMDNASIIATFPAD 2
                     QPVDMDNASIIATFPAD
Sbjct: 2693 QRIAQQAEGQPVDMDNASIIATFPAD 2718


>ref|XP_004166446.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL1-like
            [Cucumis sativus]
          Length = 3692

 Score =  132 bits (332), Expect = 3e-29
 Identities = 77/146 (52%), Positives = 84/146 (57%)
 Frame = -2

Query: 439  STDVDMNAADPEANENRDPLXXXXXXXXXXXXEQNTQVAQDNSQTDETGATNVAPNANGI 260
            S DVDMN  D E      P+            EQN  VA D +Q D++  +N A  AN I
Sbjct: 2541 SVDVDMNDNDAEEILTEQPILTTDDSRGGSTSEQNVLVAPDVNQADQSSMSNEASGANAI 2600

Query: 259  DPTFLEALPEDLRAEVLASHQPQSTPAPALSPAVAEDIDPEFLAALPPDIXXXXXXXXXX 80
            DPTFLEALPEDLRAEVLAS Q Q    P  +P  A+DIDPEFLAALPPDI          
Sbjct: 2601 DPTFLEALPEDLRAEVLASQQAQPIQPPTYAPPSADDIDPEFLAALPPDIQAEVLAQQRA 2660

Query: 79   XXXXXXXXXQPVDMDNASIIATFPAD 2
                     QPVDMDNASIIATFPAD
Sbjct: 2661 QRVAQQAEGQPVDMDNASIIATFPAD 2686


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