BLASTX nr result

ID: Atractylodes22_contig00029759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029759
         (1047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74873.1| hypothetical protein VITISV_038920 [Vitis vinifera]   191   3e-46
ref|XP_002278531.2| PREDICTED: putative nuclear matrix constitue...   189   1e-45
emb|CBI27082.3| unnamed protein product [Vitis vinifera]              165   2e-38
ref|XP_002312375.1| predicted protein [Populus trichocarpa] gi|2...   149   1e-33
ref|XP_003520054.1| PREDICTED: putative nuclear matrix constitue...   145   2e-32

>emb|CAN74873.1| hypothetical protein VITISV_038920 [Vitis vinifera]
          Length = 1234

 Score =  191 bits (485), Expect = 3e-46
 Identities = 138/333 (41%), Positives = 181/333 (54%), Gaps = 30/333 (9%)
 Frame = +2

Query: 2    GVLSKKIKDQNEEFIKERNCFLAFVEKLKKCGNCGEITRSYKLSDMQL---EVGDDSPLP 172
            G+LS+K+KDQ E+FIKER+ FL FV+K K C NCGEITR + L+D+QL   EV +  PLP
Sbjct: 759  GILSRKLKDQREQFIKERDRFLTFVDKHKTCKNCGEITREFVLNDLQLPEMEV-EAFPLP 817

Query: 173  XXXXXXXXXXXXXXXXXXAAN---------KLKSPSIGSLVSCRKKGTTVFNLSPHRKTE 325
                                N          + S S G +   RK  T +FNLSP +K+E
Sbjct: 818  NLADEFLNSPQGNMAASDGTNVKIXTGEIDLVSSGSGGRMSFLRKCATKIFNLSPSKKSE 877

Query: 326  HEHDEIM--ETPLPGTVIGVD--EHSSLLAGTGGDDCAQKGPPGVANDA--VLVTHD--- 478
            H   +++  E+PL    + ++  E  S++  +  +D  +    G+AND+  +   H    
Sbjct: 878  HVGVQVLREESPLLDLQVNLEKAEGPSIVGQSIAEDELEPS-FGIANDSFDIQQLHSDSV 936

Query: 479  -AEVDHRLPLSSDDQSYIVSKTVEAPEGSQQSEMRSGRSKLVRKPARKNRT--------V 631
              EVD     S D  S + SK  E PE SQQSE++SGR    RKP RK RT         
Sbjct: 937  MREVDGGHAQSVDGVSNMGSKEQEGPEDSQQSELKSGR----RKPGRKRRTGVHRTRSVK 992

Query: 632  EAVAEDVSIDQSKEVNEESTGASSYAEKRGGPTTRKRSYVQTSLVSGSEMDAGDSEVQSE 811
              +  D   + S   NEE    +S+AEK     TRKR    +S ++ SE DA DSE +S+
Sbjct: 993  NVLNGDERPNDSTYTNEEGERETSHAEKAASTITRKRQRAPSSRITESEQDAADSEGRSD 1052

Query: 812  SVTTGGRRKRRQTVVAPAVQTPGERRYNLRRHK 910
            SVT GGR KRRQT VAP VQTPGE+RYNLRRHK
Sbjct: 1053 SVTAGGRGKRRQT-VAPVVQTPGEKRYNLRRHK 1084


>ref|XP_002278531.2| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like [Vitis vinifera]
          Length = 1213

 Score =  189 bits (480), Expect = 1e-45
 Identities = 141/349 (40%), Positives = 184/349 (52%), Gaps = 46/349 (13%)
 Frame = +2

Query: 2    GVLSKKIKDQNEEFIKERNCFLAFVEKLKKCGNCGEITRSYKLSDMQL---EVGDDSPLP 172
            G+LS+K+KDQ E+FIKER+ FL FV+K K C NCGEITR + L+D+QL   EV +  PLP
Sbjct: 722  GILSRKLKDQREQFIKERDRFLTFVDKHKTCKNCGEITREFVLNDLQLPEMEV-EAFPLP 780

Query: 173  XXXXXXXXXXXXXXXXXXAAN---------KLKSPSIGSLVSCRKKGTTVFNLSPHRKTE 325
                                N          + S S G +   RK  T +FNLSP +K+E
Sbjct: 781  NLADEFLNSPQGNMAASDGTNVKISTGEIDLVSSGSGGRMSFLRKCATKIFNLSPSKKSE 840

Query: 326  HEHDEIM--ETPLPGTVIGVD--EHSSLLAGTGGDDCAQKGPPGVANDA--VLVTHD--- 478
            H   +++  E+PL    + ++  E  S++  +  +D  +    G+AND+  +   H    
Sbjct: 841  HVGVQVLREESPLLDLQVNLEKAEGPSIVGQSIAEDELEPS-FGIANDSFDIQQLHSDSV 899

Query: 479  -AEVDHRLPLSSDDQSYIVSKTVEAPEGSQQSEMRSGRSKLVRKPARKNRT-------VE 634
              EVD     S D  S + SK  E PE SQQSE++SGR    RKP RK RT       V+
Sbjct: 900  MREVDGGHAQSVDGVSNMGSKEQEGPEDSQQSELKSGR----RKPGRKRRTGVHRTRSVK 955

Query: 635  AVAEDVSI-----------------DQSKEVNEESTGASSYAEKRGGPTTRKRSYVQTSL 763
             V ED                    + S   NEE    +S+AEK     TRKR    +S 
Sbjct: 956  NVVEDAKAFLGETPEIPELNGDERPNDSTYTNEEGERETSHAEKAASTITRKRQRAPSSR 1015

Query: 764  VSGSEMDAGDSEVQSESVTTGGRRKRRQTVVAPAVQTPGERRYNLRRHK 910
            ++ SE DA DSE +S+SVT GGR KRRQT VAP VQTPGE+RYNLRRHK
Sbjct: 1016 ITESEQDAADSEGRSDSVTAGGRGKRRQT-VAPVVQTPGEKRYNLRRHK 1063


>emb|CBI27082.3| unnamed protein product [Vitis vinifera]
          Length = 1122

 Score =  165 bits (418), Expect = 2e-38
 Identities = 120/309 (38%), Positives = 152/309 (49%), Gaps = 6/309 (1%)
 Frame = +2

Query: 2    GVLSKKIKDQNEEFIKERNCFLAFVEKLKKCGNCGEITRSYKLSDMQLEVGDDSPLPXXX 181
            G+LS+K+KDQ E+FIKER+ FL FV+K K C NCGEITR + L+D+QL   +    P   
Sbjct: 722  GILSRKLKDQREQFIKERDRFLTFVDKHKTCKNCGEITREFVLNDLQLPEMEVEAFPLPN 781

Query: 182  XXXXXXXXXXXXXXXAANKLKSPSIGSLVSCRKKGTTVFNLSPHRKTEHEHDEIMETPLP 361
                           A   L SP      S                              
Sbjct: 782  L--------------ADEFLNSPQGNMAAS-----------------------------D 798

Query: 362  GTVIGVDEHSSLLAGTGGDDCAQKGPPGVANDA--VLVTHD----AEVDHRLPLSSDDQS 523
            GT + +      L  +G D+       G+AND+  +   H      EVD     S D  S
Sbjct: 799  GTNVKISTGEIDLVSSGSDELEPSF--GIANDSFDIQQLHSDSVMREVDGGHAQSVDGVS 856

Query: 524  YIVSKTVEAPEGSQQSEMRSGRSKLVRKPARKNRTVEAVAEDVSIDQSKEVNEESTGASS 703
             + SK  E PE SQQSE++SGR    RKP RK RT         + +++ V  E    +S
Sbjct: 857  NMGSKEQEGPEDSQQSELKSGR----RKPGRKRRT--------GVHRTRSVKNEGERETS 904

Query: 704  YAEKRGGPTTRKRSYVQTSLVSGSEMDAGDSEVQSESVTTGGRRKRRQTVVAPAVQTPGE 883
            +AEK     TRKR    +S ++ SE DA DSE +S+SVT GGR KRRQT VAP VQTPGE
Sbjct: 905  HAEKAASTITRKRQRAPSSRITESEQDAADSEGRSDSVTAGGRGKRRQT-VAPVVQTPGE 963

Query: 884  RRYNLRRHK 910
            +RYNLRRHK
Sbjct: 964  KRYNLRRHK 972


>ref|XP_002312375.1| predicted protein [Populus trichocarpa] gi|222852195|gb|EEE89742.1|
            predicted protein [Populus trichocarpa]
          Length = 1008

 Score =  149 bits (375), Expect = 1e-33
 Identities = 114/322 (35%), Positives = 156/322 (48%), Gaps = 18/322 (5%)
 Frame = +2

Query: 2    GVLSKKIKDQNEEFIKERNCFLAFVEKLKKCGNCGEITRSYKLSDMQ---LEVGDDSPLP 172
            G+LS K++ Q E+ I+ERN FL+FVEK K C NCG++TR + LSD+Q   +E  +  P P
Sbjct: 725  GMLSNKLRKQREQVIRERNYFLSFVEKHKSCTNCGDVTREFVLSDLQPPEMEERETLPSP 784

Query: 173  XXXXXXXXXXXXXXXXXXAAN-------KLKSPSIGSLVSCRKKGTTVFNLSPHRKTEHE 331
                                N        L S S G +   RK  + +F++SP RK +H 
Sbjct: 785  KISDEFFRNNEGGADASDILNIKRPLSEDLGSNSQGRMSWLRKCTSKIFSISPTRKIQHV 844

Query: 332  HDEIMETPLPGTVIGVDEHSSLLAGTGGDDCAQKGPPGVANDAVLVTHDAEVDHR----- 496
                 E   P + +  D               ++   G A    + +    VD       
Sbjct: 845  SAPAFEGGFPSSPVRAD--------------MEERVEGSAVQKAITSSSIPVDQAQVSFG 890

Query: 497  --LPLSSDDQSYIVSKTVEAPEGSQQSEMRSGRSKLVRKPARKNRTVEAVAEDVSIDQSK 670
                +S DDQSY+ SKT + PE S+ SE+++ R     KP R+ ++        + D+S+
Sbjct: 891  GGYSVSVDDQSYMDSKTQDLPEDSELSELKNRR----HKPGRRQKS----GPGRTSDESR 942

Query: 671  EVNEESTGASSYAEKRGG-PTTRKRSYVQTSLVSGSEMDAGDSEVQSESVTTGGRRKRRQ 847
             +N   T  S  A KR   PT R             E DAGDSE  SESVTTGGRRKR+Q
Sbjct: 943  GIN--VTKKSDVARKRQRLPTER-------------EQDAGDSEGHSESVTTGGRRKRQQ 987

Query: 848  TVVAPAVQTPGERRYNLRRHKM 913
             +VAP   TPG++RYNLRRHKM
Sbjct: 988  -IVAPEEPTPGQKRYNLRRHKM 1008


>ref|XP_003520054.1| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like [Glycine max]
          Length = 1210

 Score =  145 bits (365), Expect = 2e-32
 Identities = 120/346 (34%), Positives = 161/346 (46%), Gaps = 44/346 (12%)
 Frame = +2

Query: 8    LSKKIKDQNEEFIKERNCFLAFVEKLKKCGNCGEITRSYKLSDMQLEVGDDS---PLPXX 178
            LS+K+K + E  + ER  FL  VEKL+ C  CGE+ R + +SD+QL    +    P P  
Sbjct: 733  LSRKVKKERERLVAERKHFLELVEKLRSCKGCGEVVRDFVVSDIQLPDFKERVAIPSPIS 792

Query: 179  XXXXXXXXXXXXXXXXAANKLKSPSIGSLVSCRKKGTTVFNLSPHRKTEHEHDEIMETPL 358
                            A+    S S+  +   RK  T +FNLSP ++     D +    +
Sbjct: 793  PVLNDNPPKNSQDNIAASEFNISGSVKPVSWLRKCTTKIFNLSPSKRA----DAVGALDM 848

Query: 359  PGT---------VIGVDEH-SSLLAGTGGDDCAQKGPP--GVANDAVLVTH------DAE 484
            PGT         V  +DE   + L   G      +  P  G+A+ +    H        E
Sbjct: 849  PGTSPLSDVNFSVENIDEELPTSLPNIGARVIFDERQPAGGMAHHSSDTPHLQSDNIGKE 908

Query: 485  VDHRLPLSSDDQSYIVSKTVEAPEGSQQSEMRSGRSKLVRKPARKN-------RTVEAVA 643
            V     LS  D S + S     P  SQQS  + GR    RKP RK+       R+V+AV 
Sbjct: 909  VGDEYSLSVGDHSRVDSFVDGDPGDSQQSVPKLGR----RKPGRKSKSGIARTRSVKAVV 964

Query: 644  EDVSIDQSK----------------EVNEESTGASSYAEKRGGPTTRKRSYVQTSLVSGS 775
            E+      K                 + E+S   SS+ EK  G T RKR   QTS ++ S
Sbjct: 965  EEAKEFLGKAPKKIENASLQSLNTDHIREDSREDSSHTEKAIGNTRRKRQRAQTSRITES 1024

Query: 776  EMDAGDSEVQSESVTTGGRRKRRQTVVAPAVQTPGERRYNLRRHKM 913
            E +AGDSE QS+S+T GGRRK+RQT VAP  Q  GE+RYNLRRHK+
Sbjct: 1025 EQNAGDSEGQSDSITAGGRRKKRQT-VAPLTQVTGEKRYNLRRHKI 1069


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