BLASTX nr result

ID: Atractylodes22_contig00029710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029710
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC98493.1| AG-motif binding protein-3 [Nicotiana tabacum]         72   5e-11
emb|CBI16598.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002277959.1| PREDICTED: GATA transcription factor 2 [Viti...    64   1e-08
ref|XP_002880154.1| hypothetical protein ARALYDRAFT_903940 [Arab...    64   2e-08
gb|ADK63416.1| GATA type zinc finger protein [Brassica rapa]           61   1e-07

>dbj|BAC98493.1| AG-motif binding protein-3 [Nicotiana tabacum]
          Length = 256

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/101 (42%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
 Frame = -2

Query: 301 EWLSNFVHDSFSDFPANNLAGTINYRPENT-SFHSRSRSKRTRAXXXXXXXXXXXXXXXX 125
           EWLSNFV DSFS+FP N++ GT+N    +T SFHSRSRSKR+R+                
Sbjct: 87  EWLSNFVEDSFSNFPTNSITGTMNLSSNSTASFHSRSRSKRSRS----------TSSWTS 136

Query: 124 SISGKTTTKLEXXXXXXXXXXXXXSEAGFVRRCTHCASEKT 2
           S+    TT                 +    RRCTHCASEKT
Sbjct: 137 SLQNPNTTMKNKEISVHTRERSSSMDDDVPRRCTHCASEKT 177


>emb|CBI16598.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/100 (42%), Positives = 52/100 (52%)
 Frame = -2

Query: 301 EWLSNFVHDSFSDFPANNLAGTINYRPENTSFHSRSRSKRTRAXXXXXXXXXXXXXXXXS 122
           EWLSNFV DSF+DFP N LAGT+  RP+ +SF  R+RSKR+RA                 
Sbjct: 80  EWLSNFVDDSFADFPENELAGTVMARPD-SSFPGRTRSKRSRA--SSTNKVWTSSSSSSV 136

Query: 121 ISGKTTTKLEXXXXXXXXXXXXXSEAGFVRRCTHCASEKT 2
           ISG+ ++                      R+CTHCASEKT
Sbjct: 137 ISGERSSSSSPASSPTG-----------ARKCTHCASEKT 165


>ref|XP_002277959.1| PREDICTED: GATA transcription factor 2 [Vitis vinifera]
          Length = 270

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 42/113 (37%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
 Frame = -2

Query: 301 EWLSNFVHDSFSDFPANNLAGTINYRPENTSFHSRSRSKRTRAXXXXXXXXXXXXXXXXS 122
           EWLSNFV DSF+DFP N LAGT+  RP+ +SF  R+RSKR+RA                 
Sbjct: 80  EWLSNFVDDSFADFPENELAGTVMARPD-SSFPGRTRSKRSRASSTNKVWTSLPVSEIPM 138

Query: 121 ISGKTTTKLEXXXXXXXXXXXXXSEAG-------------FVRRCTHCASEKT 2
           I    T   +               +G               R+CTHCASEKT
Sbjct: 139 IGKSKTNSNKNSIVKKESSSSSSVISGERSSSSSPASSPTGARKCTHCASEKT 191


>ref|XP_002880154.1| hypothetical protein ARALYDRAFT_903940 [Arabidopsis lyrata subsp.
           lyrata] gi|297325993|gb|EFH56413.1| hypothetical protein
           ARALYDRAFT_903940 [Arabidopsis lyrata subsp. lyrata]
          Length = 262

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 40/108 (37%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
 Frame = -2

Query: 301 EWLSNFVHDSFSDFPANNLAGTINYRPENTSFHSRSRSKRTRAXXXXXXXXXXXXXXXXS 122
           EWLS FV DSF+DFPAN L GT+      TSF  + RSKR+RA                 
Sbjct: 80  EWLSQFVDDSFADFPANPLGGTMTSAKTETSFPGKPRSKRSRAPAPFAGTWSPMPTESEH 139

Query: 121 ISGKTTTKLE--------XXXXXXXXXXXXXSEAGFVRRCTHCASEKT 2
               +  K +                     +E G +RRCTHCASEKT
Sbjct: 140 HQLHSAAKFKPKKEHSGGGGGGRHQSSSSESAEGGGMRRCTHCASEKT 187


>gb|ADK63416.1| GATA type zinc finger protein [Brassica rapa]
          Length = 256

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
 Frame = -2

Query: 301 EWLSNFVHDSFSDFPANNLAGTINYRPENTSFHSRSRSKRTR--AXXXXXXXXXXXXXXX 128
           EWLS FV DSF+DFPAN L GT+      TSF  + RSKR++  +               
Sbjct: 77  EWLSQFVDDSFADFPANPLGGTMTSVKTETSFTGKPRSKRSKPPSTLVGTWAPMSETDQN 136

Query: 127 XSISGKTTTKLE--XXXXXXXXXXXXXSEAGFVRRCTHCASEKT 2
             ++G++  K E               +E   +RRCTHCA++KT
Sbjct: 137 IHVAGRSKPKKEHSGGGGRHQSSSAETAEGAGLRRCTHCATDKT 180


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