BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029695
         (1218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis ...   290   5e-76
emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera]   290   5e-76
ref|XP_002509550.1| ribosome recycling factor, putative [Ricinus...   279   9e-73
dbj|BAD44436.1| putative ribosome recycling factor [Arabidopsis ...   272   1e-70
ref|NP_186829.3| ribosome recycling factor [Arabidopsis thaliana...   272   1e-70

>ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis vinifera]
            gi|296090242|emb|CBI40061.3| unnamed protein product
            [Vitis vinifera]
          Length = 258

 Score =  290 bits (742), Expect = 5e-76
 Identities = 175/293 (59%), Positives = 204/293 (69%), Gaps = 1/293 (0%)
 Frame = -1

Query: 1170 MAISIKRAIISCRNIHPLLRISRRISHFPASPYSLQTARDPRPGLPSSPAIGFLFESRRC 991
            MAIS++RA  S R+I  LL   R +SH   SP        P     +S A+ FL ESRR 
Sbjct: 1    MAISVRRAF-SYRSI--LLLHCRHLSHIIHSP---NLTGSPSLNPSASSALDFLRESRRG 54

Query: 990  FAKPRRKWDDDDNGEIGVANGDAASRIEIV-NIGPIIKSTAISEMEAAIDAVSHELSKLR 814
            FAK R+  D D           A + +E+V +IGP +K  A+S+M+AA+ A+S ELSKLR
Sbjct: 55   FAKGRKSKDSD-----------AGNTVEVVPDIGPAVKENAMSQMDAAVVALSRELSKLR 103

Query: 813  TGRASAGMLDHIIVVTGGVKMPLNRIAVVSVLDPKTLSVTPYNPNALKELEKAIVSSPLG 634
            TGRASAGMLDHIIV TGGVKMPL+R+AVVSVLDPKTLSVTPY+ +ALK+LE AIVSSPLG
Sbjct: 104  TGRASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLSVTPYDLDALKQLENAIVSSPLG 163

Query: 633  LNPKPDGERLITAIPPMTKEHMQAVCKVVSKSSEDVKQRIRRARQKALDSIKKSLPXXXX 454
            LNPK DGERLI  IPP+TKEH+QA+CKVV+KS EDVKQ IRRARQKALD IKK+      
Sbjct: 164  LNPKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQSIRRARQKALDMIKKA------ 217

Query: 453  XXXXXXXXXXXKAKPVSGFSADDAKRLEKEVEELTKKFTKSAEDICKAKEKEI 295
                            S    D AKRLEKEV+ELTKKF KSAED+CKAKEKEI
Sbjct: 218  ---------------GSSLPKDVAKRLEKEVDELTKKFVKSAEDMCKAKEKEI 255


>emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera]
          Length = 258

 Score =  290 bits (742), Expect = 5e-76
 Identities = 175/293 (59%), Positives = 204/293 (69%), Gaps = 1/293 (0%)
 Frame = -1

Query: 1170 MAISIKRAIISCRNIHPLLRISRRISHFPASPYSLQTARDPRPGLPSSPAIGFLFESRRC 991
            MAIS++RA  S R+I  LL   R +SH   SP        P     +S A+ FL ESRR 
Sbjct: 1    MAISVRRAF-SYRSI--LLLHCRHLSHIIHSP---NLTGSPSLNPSASSALDFLRESRRG 54

Query: 990  FAKPRRKWDDDDNGEIGVANGDAASRIEIV-NIGPIIKSTAISEMEAAIDAVSHELSKLR 814
            FAK R+  D D           A + +E+V +IGP +K  A+S+M+AA+ A+S ELSKLR
Sbjct: 55   FAKGRKSKDSD-----------AGNTVEVVPDIGPAVKENAMSQMDAAVVALSRELSKLR 103

Query: 813  TGRASAGMLDHIIVVTGGVKMPLNRIAVVSVLDPKTLSVTPYNPNALKELEKAIVSSPLG 634
            TGRASAGMLDHIIV TGGVKMPL+R+AVVSVLDPKTLSVTPY+ +ALK+LE AIVSSPLG
Sbjct: 104  TGRASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLSVTPYDLDALKQLENAIVSSPLG 163

Query: 633  LNPKPDGERLITAIPPMTKEHMQAVCKVVSKSSEDVKQRIRRARQKALDSIKKSLPXXXX 454
            LNPK DGERLI  IPP+TKEH+QA+CKVV+KS EDVKQ IRRARQKALD IKK+      
Sbjct: 164  LNPKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQSIRRARQKALDXIKKA------ 217

Query: 453  XXXXXXXXXXXKAKPVSGFSADDAKRLEKEVEELTKKFTKSAEDICKAKEKEI 295
                            S    D AKRLEKEV+ELTKKF KSAED+CKAKEKEI
Sbjct: 218  ---------------GSSLPKDVAKRLEKEVDELTKKFVKSAEDMCKAKEKEI 255


>ref|XP_002509550.1| ribosome recycling factor, putative [Ricinus communis]
            gi|223549449|gb|EEF50937.1| ribosome recycling factor,
            putative [Ricinus communis]
          Length = 262

 Score =  279 bits (714), Expect = 9e-73
 Identities = 162/296 (54%), Positives = 199/296 (67%), Gaps = 3/296 (1%)
 Frame = -1

Query: 1170 MAISIKRAIISCRNIHPLLRISRRISHFPASPYSLQTAR---DPRPGLPSSPAIGFLFES 1000
            MA+ ++RA+ S  ++  LLR     S++ +S   +Q      + +      P   FL +S
Sbjct: 1    MAVYLRRAMASKNSMTTLLR-----SYYSSSNNMIQGRNVFCNCKAQSNFIPRCNFLIDS 55

Query: 999  RRCFAKPRRKWDDDDNGEIGVANGDAASRIEIVNIGPIIKSTAISEMEAAIDAVSHELSK 820
            RR FAK ++  DD   G + V            +IGP +K +A  +MEAAI ++S EL+K
Sbjct: 56   RRGFAKGKKSKDDSGGGTVQVTP----------DIGPAVKESAALQMEAAIVSLSRELTK 105

Query: 819  LRTGRASAGMLDHIIVVTGGVKMPLNRIAVVSVLDPKTLSVTPYNPNALKELEKAIVSSP 640
            LRTGRASAGMLDHIIV T GVKMPLNR+AVV+V+DPKTLSV PY+PN +  LEKAIVSSP
Sbjct: 106  LRTGRASAGMLDHIIVETDGVKMPLNRLAVVAVMDPKTLSVNPYDPNMVSALEKAIVSSP 165

Query: 639  LGLNPKPDGERLITAIPPMTKEHMQAVCKVVSKSSEDVKQRIRRARQKALDSIKKSLPXX 460
            LGLNP+ DGERLI +IPP+TKEHMQA+CKVV KS E+VKQ +RRARQKALD+IKK+    
Sbjct: 166  LGLNPRVDGERLIASIPPLTKEHMQAMCKVVGKSCEEVKQSVRRARQKALDTIKKA---- 221

Query: 459  XXXXXXXXXXXXXKAKPVSGFSADDAKRLEKEVEELTKKFTKSAEDICKAKEKEIT 292
                              S  S DD KRLEKEV+ELTKKF KSAEDICKAKEKEIT
Sbjct: 222  -----------------GSNLSKDDVKRLEKEVDELTKKFVKSAEDICKAKEKEIT 260


>dbj|BAD44436.1| putative ribosome recycling factor [Arabidopsis thaliana]
          Length = 267

 Score =  272 bits (696), Expect = 1e-70
 Identities = 164/302 (54%), Positives = 208/302 (68%), Gaps = 6/302 (1%)
 Frame = -1

Query: 1173 LMAISIKRAIISCRNIHPLLR-----ISRRISHFPASP-YSLQTARDPRPGLPSSPAIGF 1012
            +MA+ ++RA+ S RN   +LR     +  R   F +SP   +   RD +  L S P   F
Sbjct: 1    MMAMFVRRAL-SSRNAIGVLRRSSVVVQSRDFSFISSPNLMMMGGRDLQFDL-SMP--DF 56

Query: 1011 LFESRRCFAKPRRKWDDDDNGEIGVANGDAASRIEIVNIGPIIKSTAISEMEAAIDAVSH 832
            L +SRR FAK ++  DD   G +     DAA      +IGP +K+ A S+MEAAIDA+S 
Sbjct: 57   LRDSRRGFAKGKKSKDDSGTGMV-----DAAP-----DIGPTVKAAASSQMEAAIDALSR 106

Query: 831  ELSKLRTGRASAGMLDHIIVVTGGVKMPLNRIAVVSVLDPKTLSVTPYNPNALKELEKAI 652
            +L+KLRTGRA+ GMLDHI+V TGGVKMPLN +A+VSVLDPKTLSV PY+P+ +KELEKAI
Sbjct: 107  DLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYDPDTVKELEKAI 166

Query: 651  VSSPLGLNPKPDGERLITAIPPMTKEHMQAVCKVVSKSSEDVKQRIRRARQKALDSIKKS 472
            V+SPLGLNPK DG+RL+ +IP +TKEH+QA+CK+V+KSSE VKQ IRRARQKALD+IKK+
Sbjct: 167  VASPLGLNPKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVVKQSIRRARQKALDTIKKA 226

Query: 471  LPXXXXXXXXXXXXXXXKAKPVSGFSADDAKRLEKEVEELTKKFTKSAEDICKAKEKEIT 292
                                  S    D+ KRLEKEV+ELTKKF KSAED+CK+KEKEIT
Sbjct: 227  ---------------------GSSLPKDEVKRLEKEVDELTKKFVKSAEDMCKSKEKEIT 265

Query: 291  SS 286
             +
Sbjct: 266  EA 267


>ref|NP_186829.3| ribosome recycling factor [Arabidopsis thaliana]
            gi|34146850|gb|AAQ62433.1| At3g01800 [Arabidopsis
            thaliana] gi|51970776|dbj|BAD44080.1| putative ribosome
            recycling factor [Arabidopsis thaliana]
            gi|62319213|dbj|BAD94407.1| putative ribosome recycling
            factor [Arabidopsis thaliana] gi|332640195|gb|AEE73716.1|
            ribosome recycling factor [Arabidopsis thaliana]
          Length = 267

 Score =  272 bits (695), Expect = 1e-70
 Identities = 164/302 (54%), Positives = 207/302 (68%), Gaps = 6/302 (1%)
 Frame = -1

Query: 1173 LMAISIKRAIISCRNIHPLLR-----ISRRISHFPASP-YSLQTARDPRPGLPSSPAIGF 1012
            +MA+ ++RA+ S RN    LR     +  R   F +SP   +   RD +  L S P   F
Sbjct: 1    MMAMFVRRAL-SSRNAIGFLRRSSVVVQSRDFSFISSPNLMMMGGRDLQFDL-SMP--DF 56

Query: 1011 LFESRRCFAKPRRKWDDDDNGEIGVANGDAASRIEIVNIGPIIKSTAISEMEAAIDAVSH 832
            L +SRR FAK ++  DD   G +     DAA      +IGP +K+ A S+MEAAIDA+S 
Sbjct: 57   LRDSRRGFAKGKKSKDDSGTGMV-----DAAP-----DIGPTVKAAASSQMEAAIDALSR 106

Query: 831  ELSKLRTGRASAGMLDHIIVVTGGVKMPLNRIAVVSVLDPKTLSVTPYNPNALKELEKAI 652
            +L+KLRTGRA+ GMLDHI+V TGGVKMPLN +A+VSVLDPKTLSV PY+P+ +KELEKAI
Sbjct: 107  DLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYDPDTVKELEKAI 166

Query: 651  VSSPLGLNPKPDGERLITAIPPMTKEHMQAVCKVVSKSSEDVKQRIRRARQKALDSIKKS 472
            V+SPLGLNPK DG+RL+ +IP +TKEH+QA+CK+V+KSSE VKQ IRRARQKALD+IKK+
Sbjct: 167  VASPLGLNPKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVVKQSIRRARQKALDTIKKA 226

Query: 471  LPXXXXXXXXXXXXXXXKAKPVSGFSADDAKRLEKEVEELTKKFTKSAEDICKAKEKEIT 292
                                  S    D+ KRLEKEV+ELTKKF KSAED+CK+KEKEIT
Sbjct: 227  ---------------------GSSLPKDEVKRLEKEVDELTKKFVKSAEDMCKSKEKEIT 265

Query: 291  SS 286
             +
Sbjct: 266  EA 267