BLASTX nr result

ID: Atractylodes22_contig00029682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029682
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]         89   5e-16
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-...    88   6e-16
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]          87   1e-15
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]            87   1e-15
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]    87   1e-15

>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
 Frame = -3

Query: 382 WSGRAADYTEIKPFGCPAYARVDNGKLEPRAIKCVFLGYNPRVKCYKLWSFEL-KVIIS* 206
           WSG  A+Y+++K FGC AYA VDNGKLEPRAIKC+FLGY   VK YKLW  E  KV+IS 
Sbjct: 648 WSGSPANYSDLKVFGCTAYAHVDNGKLEPRAIKCIFLGYPSSVKGYKLWCPETKKVVISR 707

Query: 205 DVAFDET 185
           +V F E+
Sbjct: 708 NVVFHES 714


>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549746|gb|ABA92543.1|
           retrotransposon protein, putative, Ty1-copia subclass,
           expressed [Oryza sativa Japonica Group]
          Length = 1170

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/71 (60%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
 Frame = -3

Query: 382 WSGRAADYTEIKPFGCPAYARVDNGKLEPRAIKCVFLGYNPRVKCYKLWSFEL-KVIIS* 206
           WSG  A+Y++++ FGC AYA VDNGKLEPRAIKC+FLGY   VK YKLW  E  KV+IS 
Sbjct: 684 WSGSPANYSDLRVFGCIAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISR 743

Query: 205 DVAFDETARCY 173
           +V F E+   Y
Sbjct: 744 NVVFHESVMLY 754


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/67 (62%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
 Frame = -3

Query: 382 WSGRAADYTEIKPFGCPAYARVDNGKLEPRAIKCVFLGYNPRVKCYKLWSFEL-KVIIS* 206
           WSG  A+Y++++ FGC AYA VDNGKLEPRAIKC+FLGY+  VK YKLW  E  KV+IS 
Sbjct: 477 WSGFPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYSSGVKGYKLWCPETKKVVISR 536

Query: 205 DVAFDET 185
           +V F E+
Sbjct: 537 NVVFHES 543


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/67 (62%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
 Frame = -3

Query: 382 WSGRAADYTEIKPFGCPAYARVDNGKLEPRAIKCVFLGYNPRVKCYKLWSFEL-KVIIS* 206
           WSG  A+Y++++ FGC AYA VDNGKLEPRAIKC+FLGY+  VK YKLW  E  KV+IS 
Sbjct: 477 WSGFPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYSSGVKGYKLWCPETKKVVISR 536

Query: 205 DVAFDET 185
           +V F E+
Sbjct: 537 NVVFHES 543


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score = 86.7 bits (213), Expect(2) = 1e-15
 Identities = 42/70 (60%), Positives = 52/70 (74%), Gaps = 3/70 (4%)
 Frame = -3

Query: 382  WSGRAADYTEIKPFGCPAYARVDNGKLEPRAIKCVFLGYNPRVKCYKLWSFE---LKVII 212
            WSG+ ++Y+ +K FGCPAYA V +GKLEPRA+KC+FLGY   VK Y+LW  E    K II
Sbjct: 961  WSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFII 1020

Query: 211  S*DVAFDETA 182
            S DV FDE+A
Sbjct: 1021 SRDVTFDESA 1030



 Score = 20.8 bits (42), Expect(2) = 1e-15
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -1

Query: 180  DVTFDETAM 154
            DVTFDE+AM
Sbjct: 1023 DVTFDESAM 1031


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