BLASTX nr result

ID: Atractylodes22_contig00029666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029666
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38018.3| unnamed protein product [Vitis vinifera]              149   3e-34
ref|XP_002274534.1| PREDICTED: DNA replication licensing factor ...   149   3e-34
gb|ABY81650.1| minichromosome maintenance 4 protein [Pisum sativum]   110   9e-23
ref|XP_003607002.1| DNA replication licensing factor mcm4-B [Med...   108   6e-22
gb|ACL52406.1| unknown [Zea mays] gi|414881931|tpg|DAA59062.1| T...   107   1e-21

>emb|CBI38018.3| unnamed protein product [Vitis vinifera]
          Length = 834

 Score =  149 bits (375), Expect = 3e-34
 Identities = 81/122 (66%), Positives = 90/122 (73%), Gaps = 7/122 (5%)
 Frame = +1

Query: 1   PPPSHSRFAA-----TP-DATPTPNXXXXXXXXXXXXXXXVTATPS-TDDVPPSSEGGDP 159
           PP  HSRFAA     TP +ATPTP+                 ATPS TD+ PPSSEG + 
Sbjct: 53  PPHPHSRFAASETTPTPSEATPTPSSGRRRRGSRRASVSTPIATPSSTDEAPPSSEG-EG 111

Query: 160 DEADEAPPMFVWGTSISVQDVNAAILRFLRHFREHPSHDEGKYMKAIHHVIEIEGESLEV 339
           D+ DEAPPMFVWGT+ISVQDVNAAILRFLRHFREHPSH EGKYM+AIH V+EIEGESL+V
Sbjct: 112 DDMDEAPPMFVWGTNISVQDVNAAILRFLRHFREHPSHTEGKYMRAIHRVLEIEGESLDV 171

Query: 340 DA 345
           DA
Sbjct: 172 DA 173


>ref|XP_002274534.1| PREDICTED: DNA replication licensing factor MCM4 [Vitis vinifera]
          Length = 840

 Score =  149 bits (375), Expect = 3e-34
 Identities = 81/122 (66%), Positives = 90/122 (73%), Gaps = 7/122 (5%)
 Frame = +1

Query: 1   PPPSHSRFAA-----TP-DATPTPNXXXXXXXXXXXXXXXVTATPS-TDDVPPSSEGGDP 159
           PP  HSRFAA     TP +ATPTP+                 ATPS TD+ PPSSEG + 
Sbjct: 53  PPHPHSRFAASETTPTPSEATPTPSSGRRRRGSRRASVSTPIATPSSTDEAPPSSEG-EG 111

Query: 160 DEADEAPPMFVWGTSISVQDVNAAILRFLRHFREHPSHDEGKYMKAIHHVIEIEGESLEV 339
           D+ DEAPPMFVWGT+ISVQDVNAAILRFLRHFREHPSH EGKYM+AIH V+EIEGESL+V
Sbjct: 112 DDMDEAPPMFVWGTNISVQDVNAAILRFLRHFREHPSHTEGKYMRAIHRVLEIEGESLDV 171

Query: 340 DA 345
           DA
Sbjct: 172 DA 173


>gb|ABY81650.1| minichromosome maintenance 4 protein [Pisum sativum]
          Length = 834

 Score =  110 bits (276), Expect = 9e-23
 Identities = 60/123 (48%), Positives = 77/123 (62%), Gaps = 8/123 (6%)
 Frame = +1

Query: 1   PPPSHSRFAATPDATPTPNXXXXXXXXXXXXXXXVTATPSTDDVPPSSEGGDPDEADEAP 180
           P P+ SR A++ DATPTP+                T T ++DD+P SSEGGD  + D+A 
Sbjct: 47  PQPNRSRLASS-DATPTPSRHRRGGGIPSGRRVPATPTSTSDDIPMSSEGGDGYDMDDAG 105

Query: 181 PMFVWGTSISVQDVNAAILRFLRHFREHPSHD--------EGKYMKAIHHVIEIEGESLE 336
           P +VWGT+ISV+DVN AI RFL+HFRE  +          EGKY K I  VIE+EGES++
Sbjct: 106 PTYVWGTNISVEDVNDAIQRFLKHFREQSTSQGDIDDLDTEGKYEKLIKQVIELEGESID 165

Query: 337 VDA 345
           VDA
Sbjct: 166 VDA 168


>ref|XP_003607002.1| DNA replication licensing factor mcm4-B [Medicago truncatula]
           gi|355508057|gb|AES89199.1| DNA replication licensing
           factor mcm4-B [Medicago truncatula]
          Length = 868

 Score =  108 bits (269), Expect = 6e-22
 Identities = 60/127 (47%), Positives = 77/127 (60%), Gaps = 12/127 (9%)
 Frame = +1

Query: 1   PPPSHSRFAATPDATPTPNXXXXXXXXXXXXXXXVTATPSTDDVPPSSEGGDPDEADEAP 180
           P P+ SRFA++ DATPTP+                T T +++D P SSEGGD  + D+A 
Sbjct: 49  PQPNRSRFASS-DATPTPSRHRRGGGIPSGRRGPATPTSTSEDFPMSSEGGDGYDMDDAG 107

Query: 181 PMFVWGTSISVQDVNAAILRFLRHFREHPSHD------------EGKYMKAIHHVIEIEG 324
           P +VWGT+ISV+DVN AI RFL+HFRE  +              EGKY K I  VIE+EG
Sbjct: 108 PTYVWGTNISVEDVNDAIQRFLKHFREKSASQGGDDDLDMDLDIEGKYEKLIKQVIELEG 167

Query: 325 ESLEVDA 345
           ES++VDA
Sbjct: 168 ESIDVDA 174


>gb|ACL52406.1| unknown [Zea mays] gi|414881931|tpg|DAA59062.1| TPA: DNA
           replication licensing factor mcm4 [Zea mays]
          Length = 850

 Score =  107 bits (266), Expect = 1e-21
 Identities = 61/93 (65%), Positives = 71/93 (76%), Gaps = 14/93 (15%)
 Frame = +1

Query: 109 ATP-STDDVPPSSEGGDPDEAD-----EAPPMFVWGTSISVQDVNAAILRFLRHFRE--- 261
           +TP STDDVPPSSE GD DE D     +A P+FVWGT+ISVQDVNAAILRFLRHFR+   
Sbjct: 94  STPMSTDDVPPSSEAGD-DETDGGGGVDATPVFVWGTNISVQDVNAAILRFLRHFRDPRD 152

Query: 262 ----HPSHDEGKYMKAIHHVIEIE-GESLEVDA 345
                P  DEGKYM+AIH ++E+E GESL+VDA
Sbjct: 153 AGRVDPVMDEGKYMRAIHRILELEGGESLDVDA 185


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