BLASTX nr result

ID: Atractylodes22_contig00029664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029664
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867778.1| ubiquitin thiolesterase [Arabidopsis lyrata ...   110   2e-22
emb|CAA16779.1| putative protein [Arabidopsis thaliana] gi|72690...   110   2e-22
ref|NP_193960.2| ubiquitin-specific protease C19-related protein...   110   2e-22
ref|XP_003594168.1| Membrane protein, putative [Medicago truncat...   104   9e-21
ref|XP_004172178.1| PREDICTED: uncharacterized membrane protein ...   103   1e-20

>ref|XP_002867778.1| ubiquitin thiolesterase [Arabidopsis lyrata subsp. lyrata]
           gi|297313614|gb|EFH44037.1| ubiquitin thiolesterase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 445

 Score =  110 bits (274), Expect = 2e-22
 Identities = 61/109 (55%), Positives = 77/109 (70%), Gaps = 13/109 (11%)
 Frame = -3

Query: 315 SGPNSGS-----GPMVGLQPTGLITSGQLG-----LSAGRRSGQLE---ATNSTGKTVYG 175
           SGPNSGS     GP+  LQPTGLITSG LG     LS  RRSGQL+   +  ++ K  YG
Sbjct: 101 SGPNSGSVKKFSGPLSQLQPTGLITSGSLGSSGPILSGSRRSGQLDHQLSNLASSKPKYG 160

Query: 174 SSVTTLGYDDVRLGFRVSRKLMWVLLVMAVMGLTVGAFLTVVVKKPVIL 28
           SSVT+L  D VR+GF+V + ++W +L++A MGL VGAFLTV VKKPV++
Sbjct: 161 SSVTSLNVDPVRVGFKVPKAMVWAVLIVAAMGLLVGAFLTVAVKKPVVI 209


>emb|CAA16779.1| putative protein [Arabidopsis thaliana] gi|7269075|emb|CAB79184.1|
           putative protein [Arabidopsis thaliana]
          Length = 974

 Score =  110 bits (274), Expect = 2e-22
 Identities = 61/109 (55%), Positives = 77/109 (70%), Gaps = 13/109 (11%)
 Frame = -3

Query: 315 SGPNSGS-----GPMVGLQPTGLITSGQLG-----LSAGRRSGQLE---ATNSTGKTVYG 175
           SGPNSGS     GP+  LQPTGLITSG LG     LS  RRSGQL+   +  ++ K  YG
Sbjct: 101 SGPNSGSVKKFSGPLSQLQPTGLITSGSLGSSGPILSGSRRSGQLDHQLSNLASSKPKYG 160

Query: 174 SSVTTLGYDDVRLGFRVSRKLMWVLLVMAVMGLTVGAFLTVVVKKPVIL 28
           SSVT+L  D VR+GF+V + ++W +L++A MGL VGAFLTV VKKPV++
Sbjct: 161 SSVTSLNVDPVRVGFKVPKAMVWAVLIVAAMGLLVGAFLTVAVKKPVVI 209


>ref|NP_193960.2| ubiquitin-specific protease C19-related protein [Arabidopsis
           thaliana] gi|22655310|gb|AAM98245.1| unknown protein
           [Arabidopsis thaliana] gi|30387541|gb|AAP31936.1|
           At4g22290 [Arabidopsis thaliana]
           gi|332659188|gb|AEE84588.1| ubiquitin-specific protease
           C19-related protein [Arabidopsis thaliana]
          Length = 445

 Score =  110 bits (274), Expect = 2e-22
 Identities = 61/109 (55%), Positives = 77/109 (70%), Gaps = 13/109 (11%)
 Frame = -3

Query: 315 SGPNSGS-----GPMVGLQPTGLITSGQLG-----LSAGRRSGQLE---ATNSTGKTVYG 175
           SGPNSGS     GP+  LQPTGLITSG LG     LS  RRSGQL+   +  ++ K  YG
Sbjct: 101 SGPNSGSVKKFSGPLSQLQPTGLITSGSLGSSGPILSGSRRSGQLDHQLSNLASSKPKYG 160

Query: 174 SSVTTLGYDDVRLGFRVSRKLMWVLLVMAVMGLTVGAFLTVVVKKPVIL 28
           SSVT+L  D VR+GF+V + ++W +L++A MGL VGAFLTV VKKPV++
Sbjct: 161 SSVTSLNVDPVRVGFKVPKAMVWAVLIVAAMGLLVGAFLTVAVKKPVVI 209


>ref|XP_003594168.1| Membrane protein, putative [Medicago truncatula]
           gi|355483216|gb|AES64419.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 428

 Score =  104 bits (259), Expect = 9e-21
 Identities = 58/99 (58%), Positives = 74/99 (74%), Gaps = 3/99 (3%)
 Frame = -3

Query: 315 SGPNSGSGPMVGLQPTGLITSGQLG---LSAGRRSGQLEATNSTGKTVYGSSVTTLGYDD 145
           S  ++GSGP + LQPTGLITSG +G   + A RRSGQLE + S GK VYGS+VT+LG ++
Sbjct: 96  SRKSTGSGP-IALQPTGLITSGPVGSGPVGASRRSGQLEQSGSMGKAVYGSAVTSLG-EE 153

Query: 144 VRLGFRVSRKLMWVLLVMAVMGLTVGAFLTVVVKKPVIL 28
           V++GFRVSR ++WV +V+  M L VG FL V VKK VIL
Sbjct: 154 VKVGFRVSRSVVWVFMVVVAMCLLVGVFLMVAVKKNVIL 192


>ref|XP_004172178.1| PREDICTED: uncharacterized membrane protein At1g16860-like, partial
           [Cucumis sativus]
          Length = 435

 Score =  103 bits (258), Expect = 1e-20
 Identities = 61/121 (50%), Positives = 78/121 (64%), Gaps = 24/121 (19%)
 Frame = -3

Query: 315 SGPNSG-------SGPM-------VGLQPTGLITSGQL----------GLSAGRRSGQLE 208
           SGPNSG       SGP+       + LQPTGLITSG +           +  GRRSG LE
Sbjct: 81  SGPNSGPVTKHSNSGPISKKSSGPISLQPTGLITSGPMMGSGSLGSSGSVGGGRRSGPLE 140

Query: 207 ATNSTGKTVYGSSVTTLGYDDVRLGFRVSRKLMWVLLVMAVMGLTVGAFLTVVVKKPVIL 28
            T S+GKT+YGS+VT+L  +DV++GF+VS+ ++W  LV+ V GL VG FL V VKKP+IL
Sbjct: 141 QTASSGKTMYGSAVTSLS-EDVKIGFKVSKAVVWAFLVILVTGLLVGGFLMVAVKKPIIL 199

Query: 27  V 25
           V
Sbjct: 200 V 200


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