BLASTX nr result

ID: Atractylodes22_contig00029626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029626
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268494.2| PREDICTED: zinc finger protein VAR3, chlorop...    60   2e-07
emb|CBI31208.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002525990.1| protein with unknown function [Ricinus commu...    59   6e-07

>ref|XP_002268494.2| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Vitis
           vinifera]
          Length = 879

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
 Frame = -2

Query: 294 SRGNSHFLIKSSQQFHSQSNGNTLQENNHVPADAYLVPPS-----HPWPEWSDLLESIYN 130
           SR    F I +S   H+ +       ++++  D ++  P+     HPWPEWS L+ES+  
Sbjct: 45  SRRRLRFSITASDHLHTHAAAAASTRDDYL-GDPFVSSPNSSRTWHPWPEWSRLVESLNA 103

Query: 129 SGYFDLNRNMKDEFVPNESLSMEFLDAACSCLGFARDRADILG 1
            G      +  D FV +E L  EF+ AA +CLGF R+  + LG
Sbjct: 104 GGDIARAPSDDDAFVESEGLPDEFVRAAIACLGFGRNNPNALG 146


>emb|CBI31208.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
 Frame = -2

Query: 294 SRGNSHFLIKSSQQFHSQSNGNTLQENNHVPADAYLVPPS-----HPWPEWSDLLESIYN 130
           SR    F I +S   H+ +       ++++  D ++  P+     HPWPEWS L+ES+  
Sbjct: 45  SRRRLRFSITASDHLHTHAAAAASTRDDYL-GDPFVSSPNSSRTWHPWPEWSRLVESLNA 103

Query: 129 SGYFDLNRNMKDEFVPNESLSMEFLDAACSCLGFARDRADILG 1
            G      +  D FV +E L  EF+ AA +CLGF R+  + LG
Sbjct: 104 GGDIARAPSDDDAFVESEGLPDEFVRAAIACLGFGRNNPNALG 146


>ref|XP_002525990.1| protein with unknown function [Ricinus communis]
           gi|223534722|gb|EEF36414.1| protein with unknown
           function [Ricinus communis]
          Length = 557

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
 Frame = -2

Query: 264 SSQQFHSQSNGNTLQE-NNHVPADAYLVPPSHPWPEWSDLLESIYNSGYFDLNRNMKDEF 88
           +SQ  H  S  N +    NH   +  +V  SHPWPEW DL+E +   GYF+ N N    F
Sbjct: 62  TSQLAHPSSKANEISGYGNHTKRNDSVVQISHPWPEWVDLMEFLLKRGYFEANEN---PF 118

Query: 87  VPNESLSMEFLDAACSCLGFARDRADIL 4
           +  E  + E      +CL FARD+ +++
Sbjct: 119 LNGELGTKETNWIRTACLNFARDQYELI 146


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