BLASTX nr result

ID: Atractylodes22_contig00029600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029600
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520650.1| PREDICTED: uncharacterized protein LOC100813...    70   2e-10
emb|CBI16338.3| unnamed protein product [Vitis vinifera]               69   5e-10
ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...    69   5e-10
ref|XP_003625663.1| Chromodomain-helicase-DNA-binding protein [M...    66   3e-09
ref|XP_002328309.1| chromatin remodeling complex subunit [Populu...    61   1e-07

>ref|XP_003520650.1| PREDICTED: uncharacterized protein LOC100813574 [Glycine max]
          Length = 1429

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/79 (49%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
 Frame = +1

Query: 13  WTKGQNRVVFDNQ---ERVMRIVLFILSLK-GVTHPFLIITTSGSLSQWETMFLHVAPSN 180
           W KGQ+ ++ D+Q   ERVM+++LFILSL   V  PFLII+TS +LS WET FL +APS 
Sbjct: 173 WHKGQSALIVDDQIDQERVMKVILFILSLNCNVRRPFLIISTSAALSVWETEFLRLAPSA 232

Query: 181 DFKVSVEVGETQRSVRLLE 237
           +  V     + + S+R LE
Sbjct: 233 NLVVYKGDRDARSSIRALE 251


>emb|CBI16338.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/84 (45%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
 Frame = +1

Query: 1   LHDSWTKGQNRVVFDNQERVMRIVLFILSLKG-VTHPFLIITTSGSLSQWETMFLHVAPS 177
           L ++W KG N +V D+ +RVMR+VLFILSL+  V  PFLII+TS  L  WE  F  +A S
Sbjct: 695 LRENWHKGLNAIVIDDHDRVMRVVLFILSLQADVCRPFLIISTSSVLPLWEAEFSRLASS 754

Query: 178 NDFKVSVEVGETQRSVRLLEAQKE 249
            +  V     + +RS+R +E  +E
Sbjct: 755 VNVVVYSGNKDIRRSIRTMEFYEE 778


>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222857313|gb|EEE94860.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 2283

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
 Frame = +1

Query: 1   LHDSWTKGQNRVVFDNQERVMRIVLFILSL-KGVTHPFLIITTSGSLSQWETMFLHVAPS 177
           LHD W KG+N V+ D+QE++ +++ FILSL    + PFLIITTS SL  WE     +APS
Sbjct: 599 LHDYWLKGENAVLIDDQEQITKVISFILSLSSNASWPFLIITTSASLHSWEEELFRLAPS 658

Query: 178 NDFKVSVEVGETQRSVRLLEAQKE 249
               V     + ++S+R LE   E
Sbjct: 659 LYAVVYHGNKDIRKSIRKLEFYSE 682


>ref|XP_003625663.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
           gi|355500678|gb|AES81881.1|
           Chromodomain-helicase-DNA-binding protein [Medicago
           truncatula]
          Length = 1564

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
 Frame = +1

Query: 13  WTKGQNRVVFDNQ---ERVMRIVLFILSLK-GVTHPFLIITTSGSLSQWETMFLHVAPSN 180
           W KGQ+ V+ D+Q   ERV +++LFILSL   V  PFLII+TS  LS WE  F H+APS 
Sbjct: 295 WHKGQSAVIVDDQIDQERVRKMILFILSLSCDVKKPFLIISTSTGLSAWEIEFFHLAPSA 354

Query: 181 DFKVSVEVGETQRSVRLLEAQKE 249
           +  V     + +R +R L+   E
Sbjct: 355 NLVVYKGKEDVRRRIRALDFYNE 377


>ref|XP_002328309.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222837824|gb|EEE76189.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1996

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
 Frame = +1

Query: 1   LHDSWTKGQNRVVFDNQERVMRIVLFILSLKG-VTHPFLIITTSGSLSQWETMFLHVAPS 177
           L + W +G+N V+ D+QE++ +++ FILS+    T PFLIITTS +L  WE     +APS
Sbjct: 232 LLECWHRGENVVLIDDQEQIAKVIYFILSISSNATWPFLIITTSAALHSWEEGLFRLAPS 291

Query: 178 NDFKVSVEVGETQRSVRLLEAQKE 249
               V     + ++S+R LE   E
Sbjct: 292 LYAVVYHGNKDIRKSIRTLEFYSE 315


Top