BLASTX nr result

ID: Atractylodes22_contig00029597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029597
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding prot...   165   4e-39
ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding prot...   165   4e-39
ref|XP_002533124.1| polypyrimidine tract binding protein, putati...   164   5e-39
ref|NP_001061885.1| Os08g0436000 [Oryza sativa Japonica Group] g...   160   1e-37
gb|EEC83626.1| hypothetical protein OsI_29352 [Oryza sativa Indi...   160   1e-37

>ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 2
           [Vitis vinifera]
          Length = 420

 Score =  165 bits (417), Expect = 4e-39
 Identities = 80/89 (89%), Positives = 85/89 (95%)
 Frame = -3

Query: 268 RDYTNPYLPVNPTAIEGFAQPIVGPDGKKKEPESNVLLASIEDMLYAVTVDVIHTVFSAF 89
           RDYTNPYLPVNPTAIEG AQP +GPDGKKKEPESNVLLASIE+M YAVTVDV+HTVFSAF
Sbjct: 180 RDYTNPYLPVNPTAIEGIAQPALGPDGKKKEPESNVLLASIENMQYAVTVDVLHTVFSAF 239

Query: 88  GSVQKIAIFEKNGGTQALVQYPDVTTAAV 2
           G+VQKIAIFEKNGG QAL+QYPDVTTAAV
Sbjct: 240 GTVQKIAIFEKNGGMQALIQYPDVTTAAV 268


>ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
           [Vitis vinifera] gi|296082938|emb|CBI22239.3| unnamed
           protein product [Vitis vinifera]
          Length = 449

 Score =  165 bits (417), Expect = 4e-39
 Identities = 80/89 (89%), Positives = 85/89 (95%)
 Frame = -3

Query: 268 RDYTNPYLPVNPTAIEGFAQPIVGPDGKKKEPESNVLLASIEDMLYAVTVDVIHTVFSAF 89
           RDYTNPYLPVNPTAIEG AQP +GPDGKKKEPESNVLLASIE+M YAVTVDV+HTVFSAF
Sbjct: 209 RDYTNPYLPVNPTAIEGIAQPALGPDGKKKEPESNVLLASIENMQYAVTVDVLHTVFSAF 268

Query: 88  GSVQKIAIFEKNGGTQALVQYPDVTTAAV 2
           G+VQKIAIFEKNGG QAL+QYPDVTTAAV
Sbjct: 269 GTVQKIAIFEKNGGMQALIQYPDVTTAAV 297



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/55 (58%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
 Frame = -3

Query: 166 NVLLASIEDMLYA-VTVDVIHTVFSAFGSVQKIAIFEKNGGTQALVQYPDVTTAA 5
           NVLL +IE +    V++DVIH VFSAFG V KIA FEK  G QAL+Q+ D  TA+
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETAS 164


>ref|XP_002533124.1| polypyrimidine tract binding protein, putative [Ricinus communis]
           gi|223527087|gb|EEF29269.1| polypyrimidine tract binding
           protein, putative [Ricinus communis]
          Length = 483

 Score =  164 bits (416), Expect = 5e-39
 Identities = 82/89 (92%), Positives = 84/89 (94%)
 Frame = -3

Query: 268 RDYTNPYLPVNPTAIEGFAQPIVGPDGKKKEPESNVLLASIEDMLYAVTVDVIHTVFSAF 89
           RDYTNPYLPVNPTAIEG  QP VGPDGKKKEPESNVLLASIE+M YAVTVDVIHTVFSAF
Sbjct: 217 RDYTNPYLPVNPTAIEGPVQPAVGPDGKKKEPESNVLLASIENMQYAVTVDVIHTVFSAF 276

Query: 88  GSVQKIAIFEKNGGTQALVQYPDVTTAAV 2
           G+VQKIAIFEKNGGTQALVQYPDV TAAV
Sbjct: 277 GTVQKIAIFEKNGGTQALVQYPDVATAAV 305



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/55 (58%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
 Frame = -3

Query: 166 NVLLASIEDMLYA-VTVDVIHTVFSAFGSVQKIAIFEKNGGTQALVQYPDVTTAA 5
           NVLL +IE +    V++DVIH VFSAFG V KIA FEK  G QAL+Q+ D  TA+
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETAS 164


>ref|NP_001061885.1| Os08g0436000 [Oryza sativa Japonica Group]
           gi|42407521|dbj|BAD10638.1| putative polypyrimidine
           tract-binding protein homolog [Oryza sativa Japonica
           Group] gi|113623854|dbj|BAF23799.1| Os08g0436000 [Oryza
           sativa Japonica Group] gi|215695278|dbj|BAG90469.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|222640621|gb|EEE68753.1| hypothetical protein
           OsJ_27445 [Oryza sativa Japonica Group]
          Length = 461

 Score =  160 bits (405), Expect = 1e-37
 Identities = 77/89 (86%), Positives = 84/89 (94%)
 Frame = -3

Query: 268 RDYTNPYLPVNPTAIEGFAQPIVGPDGKKKEPESNVLLASIEDMLYAVTVDVIHTVFSAF 89
           RDYTNPYLPVNPTAIEG AQP +GPDGK KEPESNVLLASIE+M YAVTVDV+HTVFSAF
Sbjct: 209 RDYTNPYLPVNPTAIEGIAQPTLGPDGKIKEPESNVLLASIENMQYAVTVDVLHTVFSAF 268

Query: 88  GSVQKIAIFEKNGGTQALVQYPDVTTAAV 2
           G+VQKIA+FEKNGG QAL+QYPD+TTAAV
Sbjct: 269 GTVQKIAMFEKNGGMQALIQYPDITTAAV 297



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = -3

Query: 178 EPESNVLLASIEDML-YAVTVDVIHTVFSAFGSVQKIAIFEKNGGTQALVQYPDVTTA 8
           +   NVLL + E +    +++DVIH VFSAFG V KIA FEK  G QAL+QY D  TA
Sbjct: 106 DSSGNVLLVTFEGVQPNDISIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTA 163


>gb|EEC83626.1| hypothetical protein OsI_29352 [Oryza sativa Indica Group]
          Length = 461

 Score =  160 bits (405), Expect = 1e-37
 Identities = 77/89 (86%), Positives = 84/89 (94%)
 Frame = -3

Query: 268 RDYTNPYLPVNPTAIEGFAQPIVGPDGKKKEPESNVLLASIEDMLYAVTVDVIHTVFSAF 89
           RDYTNPYLPVNPTAIEG AQP +GPDGK KEPESNVLLASIE+M YAVTVDV+HTVFSAF
Sbjct: 209 RDYTNPYLPVNPTAIEGIAQPTLGPDGKIKEPESNVLLASIENMQYAVTVDVLHTVFSAF 268

Query: 88  GSVQKIAIFEKNGGTQALVQYPDVTTAAV 2
           G+VQKIA+FEKNGG QAL+QYPD+TTAAV
Sbjct: 269 GTVQKIAMFEKNGGMQALIQYPDITTAAV 297



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = -3

Query: 178 EPESNVLLASIEDML-YAVTVDVIHTVFSAFGSVQKIAIFEKNGGTQALVQYPDVTTA 8
           +   NVLL + E +    +++DVIH VFSAFG V KIA FEK  G QAL+QY D  TA
Sbjct: 106 DSSGNVLLVTFEGVQPNDISIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTA 163


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