BLASTX nr result

ID: Atractylodes22_contig00029585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029585
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   198   4e-49
emb|CBI20904.3| unnamed protein product [Vitis vinifera]              198   4e-49
ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus comm...   192   2e-47
ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis th...   192   3e-47
emb|CAA18591.1| putative protein [Arabidopsis thaliana] gi|72701...   192   3e-47

>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
            vinifera]
          Length = 2181

 Score =  198 bits (503), Expect = 4e-49
 Identities = 93/121 (76%), Positives = 108/121 (89%)
 Frame = +2

Query: 2    TDFRPVPLEEYIKVGNVIYNKKMELVRTIPKRADLGGKDPDHVIELCNEVVQEGHSVLIF 181
            TDFRPVPLEEYIKVGN IY+KKM+++RTI K ADLGGKDPDH++ELCNEVVQEGHSVL+F
Sbjct: 725  TDFRPVPLEEYIKVGNTIYDKKMDIIRTISKTADLGGKDPDHIVELCNEVVQEGHSVLLF 784

Query: 182  CSSRKGCESTARHVAKYLKKFYVNTPDSESEYPDIASAIDALQKSPAGLDPILAETLSSG 361
            CSSRKGCE TARHV+K+LKKF  N  ++  E+ DI+SAIDAL++SPAGLDPIL ETL SG
Sbjct: 785  CSSRKGCEFTARHVSKFLKKFSTNAHNNTGEFVDISSAIDALRRSPAGLDPILEETLPSG 844

Query: 362  V 364
            V
Sbjct: 845  V 845


>emb|CBI20904.3| unnamed protein product [Vitis vinifera]
          Length = 2091

 Score =  198 bits (503), Expect = 4e-49
 Identities = 93/121 (76%), Positives = 108/121 (89%)
 Frame = +2

Query: 2    TDFRPVPLEEYIKVGNVIYNKKMELVRTIPKRADLGGKDPDHVIELCNEVVQEGHSVLIF 181
            TDFRPVPLEEYIKVGN IY+KKM+++RTI K ADLGGKDPDH++ELCNEVVQEGHSVL+F
Sbjct: 684  TDFRPVPLEEYIKVGNTIYDKKMDIIRTISKTADLGGKDPDHIVELCNEVVQEGHSVLLF 743

Query: 182  CSSRKGCESTARHVAKYLKKFYVNTPDSESEYPDIASAIDALQKSPAGLDPILAETLSSG 361
            CSSRKGCE TARHV+K+LKKF  N  ++  E+ DI+SAIDAL++SPAGLDPIL ETL SG
Sbjct: 744  CSSRKGCEFTARHVSKFLKKFSTNAHNNTGEFVDISSAIDALRRSPAGLDPILEETLPSG 803

Query: 362  V 364
            V
Sbjct: 804  V 804


>ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus communis]
            gi|223544402|gb|EEF45923.1| DNA polymerase theta,
            putative [Ricinus communis]
          Length = 2154

 Score =  192 bits (489), Expect = 2e-47
 Identities = 91/121 (75%), Positives = 110/121 (90%)
 Frame = +2

Query: 2    TDFRPVPLEEYIKVGNVIYNKKMELVRTIPKRADLGGKDPDHVIELCNEVVQEGHSVLIF 181
            T+FRPVPLEE+IKVGN IY+KKM++VRTIP+ A+LGGKDPDH++ELCNEVVQ+GHSVLIF
Sbjct: 706  TNFRPVPLEEFIKVGNTIYDKKMDIVRTIPRAAELGGKDPDHIVELCNEVVQDGHSVLIF 765

Query: 182  CSSRKGCESTARHVAKYLKKFYVNTPDSESEYPDIASAIDALQKSPAGLDPILAETLSSG 361
            CSSRKGCESTA+HV+K+LKKF VN   + SE+ DIASA++AL++SP GLDPIL ETL SG
Sbjct: 766  CSSRKGCESTAKHVSKFLKKFSVNV-QNNSEFLDIASAVEALRRSPVGLDPILEETLPSG 824

Query: 362  V 364
            V
Sbjct: 825  V 825


>ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis thaliana]
            gi|62241195|dbj|BAD93700.1| helicase and polymerase
            containing protein TEBICHI [Arabidopsis thaliana]
            gi|332660705|gb|AEE86105.1| DNA polymerase theta subunit
            [Arabidopsis thaliana]
          Length = 2154

 Score =  192 bits (487), Expect = 3e-47
 Identities = 90/121 (74%), Positives = 106/121 (87%)
 Frame = +2

Query: 2    TDFRPVPLEEYIKVGNVIYNKKMELVRTIPKRADLGGKDPDHVIELCNEVVQEGHSVLIF 181
            T+FRPVPLEEYIKVG+ IYNKKME+VRTIPK AD+GGKDPDH++ELCNEVVQEG+SVLIF
Sbjct: 716  TEFRPVPLEEYIKVGSTIYNKKMEVVRTIPKAADMGGKDPDHIVELCNEVVQEGNSVLIF 775

Query: 182  CSSRKGCESTARHVAKYLKKFYVNTPDSESEYPDIASAIDALQKSPAGLDPILAETLSSG 361
            CSSRKGCESTARH++K +K   VN     SE+ DI SAIDAL++SP+G+DP+L ETL SG
Sbjct: 776  CSSRKGCESTARHISKLIKNVPVNVDGENSEFMDIRSAIDALRRSPSGVDPVLEETLPSG 835

Query: 362  V 364
            V
Sbjct: 836  V 836


>emb|CAA18591.1| putative protein [Arabidopsis thaliana] gi|7270174|emb|CAB79987.1|
           putative protein [Arabidopsis thaliana]
          Length = 1548

 Score =  192 bits (487), Expect = 3e-47
 Identities = 90/121 (74%), Positives = 106/121 (87%)
 Frame = +2

Query: 2   TDFRPVPLEEYIKVGNVIYNKKMELVRTIPKRADLGGKDPDHVIELCNEVVQEGHSVLIF 181
           T+FRPVPLEEYIKVG+ IYNKKME+VRTIPK AD+GGKDPDH++ELCNEVVQEG+SVLIF
Sbjct: 176 TEFRPVPLEEYIKVGSTIYNKKMEVVRTIPKAADMGGKDPDHIVELCNEVVQEGNSVLIF 235

Query: 182 CSSRKGCESTARHVAKYLKKFYVNTPDSESEYPDIASAIDALQKSPAGLDPILAETLSSG 361
           CSSRKGCESTARH++K +K   VN     SE+ DI SAIDAL++SP+G+DP+L ETL SG
Sbjct: 236 CSSRKGCESTARHISKLIKNVPVNVDGENSEFMDIRSAIDALRRSPSGVDPVLEETLPSG 295

Query: 362 V 364
           V
Sbjct: 296 V 296


Top