BLASTX nr result
ID: Atractylodes22_contig00029563
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00029563 (477 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280962.2| PREDICTED: uncharacterized protein LOC100254... 60 1e-07 ref|XP_002862184.1| hypothetical protein ARALYDRAFT_497554 [Arab... 58 7e-07 gb|AAM61550.1| unknown [Arabidopsis thaliana] 57 1e-06 ref|NP_850258.1| transcription termination factor domain-contain... 57 2e-06 ref|NP_850257.1| transcription termination factor domain-contain... 57 2e-06 >ref|XP_002280962.2| PREDICTED: uncharacterized protein LOC100254596 [Vitis vinifera] Length = 335 Score = 60.5 bits (145), Expect = 1e-07 Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 9/68 (13%) Frame = +3 Query: 285 VPPKPST---------PHSISAANTTTELQEKLLYLDSFGIDLIPLLTTHPPLVSTSLSH 437 +PPKPS P S + ++ +EK+LYLDS G+DL L+ HPP+V SL Sbjct: 48 IPPKPSKSPELPSISPPSSPDPPDPHSQFEEKMLYLDSIGLDLFSLINDHPPIVCASLDD 107 Query: 438 IKSTVSFL 461 IKSTV FL Sbjct: 108 IKSTVDFL 115 >ref|XP_002862184.1| hypothetical protein ARALYDRAFT_497554 [Arabidopsis lyrata subsp. lyrata] gi|297823411|ref|XP_002879588.1| hypothetical protein ARALYDRAFT_482571 [Arabidopsis lyrata subsp. lyrata] gi|297307418|gb|EFH38442.1| hypothetical protein ARALYDRAFT_497554 [Arabidopsis lyrata subsp. lyrata] gi|297325427|gb|EFH55847.1| hypothetical protein ARALYDRAFT_482571 [Arabidopsis lyrata subsp. lyrata] Length = 330 Score = 58.2 bits (139), Expect = 7e-07 Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 5/62 (8%) Frame = +3 Query: 297 PSTPHSISAANTTTE-----LQEKLLYLDSFGIDLIPLLTTHPPLVSTSLSHIKSTVSFL 461 P+ P S+S+ TTE + EKL+YLDS GID + L+ HPPL+ST+LS ++S V ++ Sbjct: 49 PNIP-SLSSTTATTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESVVDYM 107 Query: 462 ST 467 +T Sbjct: 108 TT 109 >gb|AAM61550.1| unknown [Arabidopsis thaliana] Length = 320 Score = 57.4 bits (137), Expect = 1e-06 Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 6/66 (9%) Frame = +3 Query: 288 PPKPSTPHSISAANTTT------ELQEKLLYLDSFGIDLIPLLTTHPPLVSTSLSHIKST 449 P PS + + TTT + EKL+YLDS GID + L+ HPPL+ST+LS ++S Sbjct: 51 PDIPSLSSTXTTTTTTTTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESV 110 Query: 450 VSFLST 467 V +++T Sbjct: 111 VDYMTT 116 >ref|NP_850258.1| transcription termination factor domain-containing protein [Arabidopsis thaliana] gi|20197994|gb|AAD21457.2| expressed protein [Arabidopsis thaliana] gi|222423006|dbj|BAH19486.1| AT2G36000 [Arabidopsis thaliana] gi|330254096|gb|AEC09190.1| transcription termination factor domain-containing protein [Arabidopsis thaliana] Length = 318 Score = 57.0 bits (136), Expect = 2e-06 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 7/64 (10%) Frame = +3 Query: 297 PSTPHSISAANTTT-------ELQEKLLYLDSFGIDLIPLLTTHPPLVSTSLSHIKSTVS 455 P P S TTT + EKL+YLDS GID + L+ HPPL+ST+LS ++S V Sbjct: 51 PDIPSLSSTTTTTTTTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESVVD 110 Query: 456 FLST 467 +++T Sbjct: 111 YMTT 114 >ref|NP_850257.1| transcription termination factor domain-containing protein [Arabidopsis thaliana] gi|14532494|gb|AAK63975.1| At2g36000/F11F19.9 [Arabidopsis thaliana] gi|14532528|gb|AAK63992.1| At2g36000/F11F19.9 [Arabidopsis thaliana] gi|18655377|gb|AAL76144.1| At2g36000/F11F19.9 [Arabidopsis thaliana] gi|330254095|gb|AEC09189.1| transcription termination factor domain-containing protein [Arabidopsis thaliana] Length = 333 Score = 57.0 bits (136), Expect = 2e-06 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 7/64 (10%) Frame = +3 Query: 297 PSTPHSISAANTTT-------ELQEKLLYLDSFGIDLIPLLTTHPPLVSTSLSHIKSTVS 455 P P S TTT + EKL+YLDS GID + L+ HPPL+ST+LS ++S V Sbjct: 51 PDIPSLSSTTTTTTTTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESVVD 110 Query: 456 FLST 467 +++T Sbjct: 111 YMTT 114