BLASTX nr result

ID: Atractylodes22_contig00029563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029563
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280962.2| PREDICTED: uncharacterized protein LOC100254...    60   1e-07
ref|XP_002862184.1| hypothetical protein ARALYDRAFT_497554 [Arab...    58   7e-07
gb|AAM61550.1| unknown [Arabidopsis thaliana]                          57   1e-06
ref|NP_850258.1| transcription termination factor domain-contain...    57   2e-06
ref|NP_850257.1| transcription termination factor domain-contain...    57   2e-06

>ref|XP_002280962.2| PREDICTED: uncharacterized protein LOC100254596 [Vitis vinifera]
          Length = 335

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
 Frame = +3

Query: 285 VPPKPST---------PHSISAANTTTELQEKLLYLDSFGIDLIPLLTTHPPLVSTSLSH 437
           +PPKPS          P S    +  ++ +EK+LYLDS G+DL  L+  HPP+V  SL  
Sbjct: 48  IPPKPSKSPELPSISPPSSPDPPDPHSQFEEKMLYLDSIGLDLFSLINDHPPIVCASLDD 107

Query: 438 IKSTVSFL 461
           IKSTV FL
Sbjct: 108 IKSTVDFL 115


>ref|XP_002862184.1| hypothetical protein ARALYDRAFT_497554 [Arabidopsis lyrata subsp.
           lyrata] gi|297823411|ref|XP_002879588.1| hypothetical
           protein ARALYDRAFT_482571 [Arabidopsis lyrata subsp.
           lyrata] gi|297307418|gb|EFH38442.1| hypothetical protein
           ARALYDRAFT_497554 [Arabidopsis lyrata subsp. lyrata]
           gi|297325427|gb|EFH55847.1| hypothetical protein
           ARALYDRAFT_482571 [Arabidopsis lyrata subsp. lyrata]
          Length = 330

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 5/62 (8%)
 Frame = +3

Query: 297 PSTPHSISAANTTTE-----LQEKLLYLDSFGIDLIPLLTTHPPLVSTSLSHIKSTVSFL 461
           P+ P S+S+   TTE     + EKL+YLDS GID + L+  HPPL+ST+LS ++S V ++
Sbjct: 49  PNIP-SLSSTTATTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESVVDYM 107

Query: 462 ST 467
           +T
Sbjct: 108 TT 109


>gb|AAM61550.1| unknown [Arabidopsis thaliana]
          Length = 320

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 6/66 (9%)
 Frame = +3

Query: 288 PPKPSTPHSISAANTTT------ELQEKLLYLDSFGIDLIPLLTTHPPLVSTSLSHIKST 449
           P  PS   + +   TTT       + EKL+YLDS GID + L+  HPPL+ST+LS ++S 
Sbjct: 51  PDIPSLSSTXTTTTTTTTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESV 110

Query: 450 VSFLST 467
           V +++T
Sbjct: 111 VDYMTT 116


>ref|NP_850258.1| transcription termination factor domain-containing protein
           [Arabidopsis thaliana] gi|20197994|gb|AAD21457.2|
           expressed protein [Arabidopsis thaliana]
           gi|222423006|dbj|BAH19486.1| AT2G36000 [Arabidopsis
           thaliana] gi|330254096|gb|AEC09190.1| transcription
           termination factor domain-containing protein
           [Arabidopsis thaliana]
          Length = 318

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 7/64 (10%)
 Frame = +3

Query: 297 PSTPHSISAANTTT-------ELQEKLLYLDSFGIDLIPLLTTHPPLVSTSLSHIKSTVS 455
           P  P   S   TTT        + EKL+YLDS GID + L+  HPPL+ST+LS ++S V 
Sbjct: 51  PDIPSLSSTTTTTTTTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESVVD 110

Query: 456 FLST 467
           +++T
Sbjct: 111 YMTT 114


>ref|NP_850257.1| transcription termination factor domain-containing protein
           [Arabidopsis thaliana] gi|14532494|gb|AAK63975.1|
           At2g36000/F11F19.9 [Arabidopsis thaliana]
           gi|14532528|gb|AAK63992.1| At2g36000/F11F19.9
           [Arabidopsis thaliana] gi|18655377|gb|AAL76144.1|
           At2g36000/F11F19.9 [Arabidopsis thaliana]
           gi|330254095|gb|AEC09189.1| transcription termination
           factor domain-containing protein [Arabidopsis thaliana]
          Length = 333

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 7/64 (10%)
 Frame = +3

Query: 297 PSTPHSISAANTTT-------ELQEKLLYLDSFGIDLIPLLTTHPPLVSTSLSHIKSTVS 455
           P  P   S   TTT        + EKL+YLDS GID + L+  HPPL+ST+LS ++S V 
Sbjct: 51  PDIPSLSSTTTTTTTTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESVVD 110

Query: 456 FLST 467
           +++T
Sbjct: 111 YMTT 114


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