BLASTX nr result

ID: Atractylodes22_contig00029546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029546
         (1331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332417.1| predicted protein [Populus trichocarpa] gi|2...   199   2e-48
ref|XP_002513116.1| pentatricopeptide repeat-containing protein,...   189   2e-45
ref|XP_003522216.1| PREDICTED: uncharacterized protein LOC100797...   184   6e-44
ref|XP_003598926.1| hypothetical protein MTR_3g023510 [Medicago ...   172   2e-40
ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containi...   169   1e-39

>ref|XP_002332417.1| predicted protein [Populus trichocarpa] gi|222832370|gb|EEE70847.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  199 bits (505), Expect = 2e-48
 Identities = 127/376 (33%), Positives = 193/376 (51%), Gaps = 46/376 (12%)
 Frame = +3

Query: 180  WEERFCISVG-IPWEKVVNAKKYMPCYDNVVKWNDSAGEEAFCDAKKRFWAEINGIPADV 356
            WE++FC  +G +PW KVV+AKKYM C+ N++ W+DSAGEEAF +AKKRFWAEING+   +
Sbjct: 41   WEKKFCSLIGSVPWRKVVDAKKYMYCHGNILNWDDSAGEEAFHNAKKRFWAEINGVSCGI 100

Query: 357  PQPDPDMYTNEIDWNPDIDLELVKDLDLAYFNPDETE---RVENFDAAKKNVDSWVP--G 521
              PDP+++ +EI WN  ID E++KDL+   F PDE +   +V   +  ++N  S +P  G
Sbjct: 101  SPPDPNLFIDEIKWNAYIDPEVIKDLEQDLFVPDEGDTGGKVGRKNKKRRNFVS-IPSNG 159

Query: 522  CILGLDDKNLSNMDDPWERSKNA----NLYNKTDGWNCSNNSVNKN-----ISDPWERGA 674
            C    DD     + +PWE + N     +L +K   WN  ++ +NK+     + +PWERG 
Sbjct: 160  CYENTDD-----VKNPWESNNNTQSSLSLIDKAKSWNQWDSDINKSSNLNKVDNPWERGF 214

Query: 675  TQDDREIKDIAWRGGGSSSWHKDNTWRGGARNSGNNEITWGGGANNSWHHNQHPVQNDTW 854
            +Q+   +K   W   G+ SW        G  +SGN+        +N W++N +P     W
Sbjct: 215  SQESEAVKGKTWGVCGNKSW--------GWNHSGNHV-----DQSNDWNNNSNP-----W 256

Query: 855  ASVQRTDGSVKETGWGSNRNS---YGRH--------------GYVSTSRGSRAPSRQRGD 983
               ++      + GWG+ R+S   Y +H              G+   S  S+   R+  D
Sbjct: 257  QHSRQGVDPANDKGWGNLRDSSRGYNQHESRKWNNDCKSSGNGFFQGSGASK--DRKWED 314

Query: 984  YRHTSFGREQWHD-------------GSGWES-NVSCRKREGPQQYASHYKSARLQSDDY 1121
                S G +QW +             G GWE+ N    +REG  Q+ + Y+S R Q D +
Sbjct: 315  NGSNSQGWKQWDNYGKNTKGLDFRKHGGGWETRNEGSWQREGAHQHITGYESTRFQGDGF 374

Query: 1122 REGNQYWR*ETHNRVS 1169
            + G+ +    T  RVS
Sbjct: 375  QTGHSWSGGRTKRRVS 390


>ref|XP_002513116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548127|gb|EEF49619.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1128

 Score =  189 bits (479), Expect = 2e-45
 Identities = 133/433 (30%), Positives = 199/433 (45%), Gaps = 68/433 (15%)
 Frame = +3

Query: 48   MGKWNYRRRW------TPRNYYRDQRIPSPPTYYDTEFKLRGAWKNVDLPWEERFCISVG 209
            MG W  RRR+       P + Y + + P PP          G  ++    WE++FC  +G
Sbjct: 1    MGNWRNRRRFFYHQYRDPASSYYNHQEPPPP--------YPGFAEDGVPSWEKKFCSLIG 52

Query: 210  -IPWEKVVNAKKYMPCYDNVVKWNDSAGEEAFCDAKKRFWAEINGIPADVPQPDPDMYTN 386
             +PW+K+VN KK+M C+D V+ WNDSAG +AF +AK RFWA+IN +P  +  PDPDMY +
Sbjct: 53   SVPWQKIVNVKKFMYCHDIVINWNDSAGADAFQNAKNRFWADINRLPCQISLPDPDMYVD 112

Query: 387  EIDWNPDIDLELVKDLDLAYFNPDETERVENFDAAKKNVDSWVPGCILGLDDKNLSNMDD 566
            +I+W+PDID ELVK+L+ A+F P+E E  +N +   K    ++     G  ++N   +  
Sbjct: 113  DINWHPDIDPELVKELERAFFAPEEGENNDNVECKNKKARHFLSVPSEGW-NRNPDEVRI 171

Query: 567  PW----ERSKNANLYNKTDGWN----CSNNSVNKNISD-PWERGATQDDREIKDIAW--- 710
            PW    E   N  +  KT GWN     +N+S N N  D PW    TQ +  ++   W   
Sbjct: 172  PWECEDEGGSNVAVEEKTRGWNQWRISTNSSRNVNNGDTPWVSHFTQGNEAVEGKTWGNC 231

Query: 711  ----RGGGSSSWHKDNTWRGGARNSGNNEITWG-----------GGANNSWHHNQHPVQ- 842
                +G   S  ++   W  G+ N  N++  WG            G    W H  + V  
Sbjct: 232  ADKLQGWSGSVHNQAKDW--GSCNLTNDDKPWGHSYLKGTWRESSGKLWGWSHKGNQVNQ 289

Query: 843  -------NDTWASVQRTDGSVKETGWG-SNRNSYGRHGYV------------STSRGSR- 959
                    + W    +    VK+  WG SN  S+G++  V            + ++GSR 
Sbjct: 290  SKEWDSGGNPWEHSSQGVVLVKDNVWGNSNHISWGKNKQVGKFSHGENSRQSNLAQGSRD 349

Query: 960  APSRQRGDYRHTSFGREQWHD------------GSGWESNVSCRKREGPQQYASHYKSAR 1103
               RQ    R    G  +WH+             SG       R REG  +Y + +K  R
Sbjct: 350  QKDRQGRGSRGNEHGWIRWHNPYRDLKDLELGQRSGGRRTWDDRMREGSHEYVTGHKHTR 409

Query: 1104 LQSDDYREGNQYW 1142
            ++ +DY +    W
Sbjct: 410  VEGNDYHQAGHRW 422


>ref|XP_003522216.1| PREDICTED: uncharacterized protein LOC100797066 [Glycine max]
          Length = 387

 Score =  184 bits (466), Expect = 6e-44
 Identities = 120/367 (32%), Positives = 185/367 (50%), Gaps = 19/367 (5%)
 Frame = +3

Query: 48   MGKWNYRRRWTPRNYYRDQRIP-SPPTYYDTEFKLRGAWKNVDLPWEERFCISVG-IPWE 221
            MGKW++R     R ++R +R P  PPT+YD    L   W++    WE+++C  VG +PW+
Sbjct: 1    MGKWDHR---PSRRFFRRRRSPVRPPTFYDINAPLPEYWQDGIPLWEKKYCTIVGLVPWQ 57

Query: 222  KVVNAKKYMPCYDNVVKWNDSAGEEAFCDAKKRFWAEINGIPADVPQPDPDMYTNEIDWN 401
            K+V++K ++ C+ NV  WNDSA EEA  +AK  +WA+IN +P D+  PDPD Y ++IDWN
Sbjct: 58   KIVDSKMFVYCHSNVFDWNDSAAEEALQNAKNHYWAKINSLPCDISLPDPDTYNDQIDWN 117

Query: 402  PDIDLELVKDLDLAYFN-PDETERVENFDAAKKNVDSWVPGCILGLDDKN-LSNMDDPWE 575
            P ID +++K++D A+F  PDE +     + A KN  +        ++D+N L   D P  
Sbjct: 118  PYIDPDMIKEIDKAFFTVPDEEQ-----ETAIKNKRTKT-----SVNDENPLECSDTPLS 167

Query: 576  RSKNANLYNKTDGWNCSNNSVNKNISDPWERGATQDDREIKDIAWRGGGSSSW----HKD 743
            R+      N+   WN  N+    N  +PWE   T  +  + D AW GG   SW     +D
Sbjct: 168  RALE---NNEVQRWNQGNSGDVDNTDNPWECSVTHGNGRLTDNAWEGGPVKSWGWNEGRD 224

Query: 744  NTWRGGARNSGNNEITWGGGANNSW----HHNQHPVQNDTW-ASVQRTDGSVKETGW--- 899
            +       +    +  WG   ++SW     +N     N +W     + + +  +TGW   
Sbjct: 225  HNQCKDWNSENLQDKGWGKARDSSWCQQQSNNLANFGNSSWQCKSSQQNVTPLKTGWRNS 284

Query: 900  GSNRNSYGRHGYVSTSRGSRAPSRQRGDYRHTSFGREQWHDGSGWE---SNVSCRKREGP 1070
            G+N + + +      SR      R  G +   + G  QW +GS W    SN S  +R+G 
Sbjct: 285  GANGSGWKQQEKADVSR------RNYGGWTAQNKG-NQWREGSHWHTLGSNGSQFQRDGC 337

Query: 1071 QQYASHY 1091
            Q    HY
Sbjct: 338  Q--TGHY 342


>ref|XP_003598926.1| hypothetical protein MTR_3g023510 [Medicago truncatula]
            gi|355487974|gb|AES69177.1| hypothetical protein
            MTR_3g023510 [Medicago truncatula]
          Length = 365

 Score =  172 bits (435), Expect = 2e-40
 Identities = 123/391 (31%), Positives = 189/391 (48%), Gaps = 23/391 (5%)
 Frame = +3

Query: 48   MGKWNYRRRWTPRNYYRDQRIPSPPT-YYDTEFKLRGAWKNVDLP-WEERFCISVG-IPW 218
            MGKWNYR    P   +R +R P+PP+ +YD    L   +++  +P WE+++C   G +PW
Sbjct: 1    MGKWNYR----PSRRFR-RRSPNPPSIFYDIRAPLP-EFRHDGIPVWEKKYCTLSGCVPW 54

Query: 219  EKVVNAKKYMPCYDNVVKWNDSAGEEAFCDAKKRFWAEINGIPADVPQPDPDMYTNEIDW 398
            +K+V++K+ + C+ NV+ W DS  EEAF +AKKR+WA +N +P D+  PDPD Y  +IDW
Sbjct: 55   QKIVDSKELIYCHHNVLDWKDSGAEEAFQNAKKRYWANVNNLPCDISLPDPDAYIEQIDW 114

Query: 399  NPDIDLELVKDLDLAYFNPDETERVENFDAAKKNVDSWVPGCILGLDDKNLSNMDDPWE- 575
            NP ID EL+K+LD A+F   + E  EN    K+          + +D +N      PWE 
Sbjct: 115  NPCIDAELIKELDNAFFTVPDEEEQENAIQYKRTK--------ISVDGEN------PWEC 160

Query: 576  ------RSKNANLYNKTDGWNCSNNSVNKNISD-PWERGATQDDREIKDIAWRGG--GSS 728
                  R    N     +  +  +NS N   +D PW   A   ++ + D AW GG   S 
Sbjct: 161  AATSVGRGLENNEVQGQNQGDYHDNSENVGTTDNPWVSSAVCGNQGLTDNAWEGGHVKSR 220

Query: 729  SWH--KDNTWRGGARNSG--NNEITWGGGANNSWHH---NQHPVQNDTWASVQRTDGSV- 884
             W+  +D+  +    NSG    +  WG   +NSW H   N      ++W         + 
Sbjct: 221  GWNEGRDHNNQCSGWNSGCLQTDKGWGKVRDNSWCHQKSNNLANSGNSWGCKSSQQNVIP 280

Query: 885  KETGWGSNRNSYGRHGYVSTSRGSRAPSRQRGDYRHTSFGREQWHDGSGWESNVSC--RK 1058
              TGW   RNS           G+  P  ++ +  + +   +   +  GW S      + 
Sbjct: 281  MNTGW---RNS-----------GTIVPRWKQHENAYVTSDSQFRRNNGGWNSGNQSYHQM 326

Query: 1059 REGPQQYASHYKSARLQSDDYREGNQYWR*E 1151
            R G  ++   Y  ++ Q DD + G+ YWR E
Sbjct: 327  RGGSNRHNPSYNGSQPQRDDSQTGH-YWRRE 356


>ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20740-like [Vitis vinifera]
          Length = 1294

 Score =  169 bits (428), Expect = 1e-39
 Identities = 99/265 (37%), Positives = 137/265 (51%), Gaps = 13/265 (4%)
 Frame = +3

Query: 150 RGAWKNVDLPWEERFCISVGIPWEKVVNAKKYMPCYDNVVKWNDSAGEEAFCDAKKRFWA 329
           +G W+N    WE+RFC SVGIPW KVV+AKKY+  + +V+ WND AGEEAF +AK+RFWA
Sbjct: 13  KGLWQNSVPSWEKRFCTSVGIPWGKVVDAKKYIHYHVDVLNWNDLAGEEAFHNAKRRFWA 72

Query: 330 EINGIPADVPQPDPDMYTNEIDWNPDIDLELVKDLDLAYFNPDETERVENFDAAKKNVDS 509
           EINGIP  + QPDPD+Y + IDWNP ID EL+++LD  +F+PDE E+             
Sbjct: 73  EINGIPCSISQPDPDIYIDNIDWNPXIDPELMRNLDKEFFSPDEREQ------------- 119

Query: 510 WVPGCILGLDDKNLSNMDDPWERSKNANLYNKTDGWN----CSNNSVNKNISDPWERGAT 677
                    D KN ++ D+PWE +    L ++   W+    C     N + ++    G  
Sbjct: 120 ---------DCKNPASGDNPWELNMPKTLKDRAWAWDKWGGCKTELRNLDKTNSQVSGYA 170

Query: 678 QDDREIKDIAWRGGGSSSWHKDNTWRGGARNSGNNEITWGG---------GANNSWHHNQ 830
            +    K      GG S W   N  +G  +        WGG         G +N W H  
Sbjct: 171 TEGHYRKP----DGGDSPWEYWNV-QGVLKEKARVRNQWGGNINESRNLNGDDNRWKH-- 223

Query: 831 HPVQNDTWASVQRTDGSVKETGWGS 905
               + TWAS     G+V++  WG+
Sbjct: 224 ----SCTWAS-----GAVRDDSWGN 239



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 58/205 (28%), Positives = 82/205 (40%), Gaps = 9/205 (4%)
 Frame = +3

Query: 546  NLSNMDDPWERSKN-ANLYNK-------TDGWNCSNNSVNKN-ISDPWERGATQDDREIK 698
            NL N  D W  S N AN   +       + GWN  N S N + + DPWERG     +  +
Sbjct: 260  NLDNGVDNWNSSCNQANAAQRDNACGGWSQGWNYQNKSRNLDTVDDPWERGC----QGTE 315

Query: 699  DIAWRGGGSSSWHKDNTWRGGARNSGNNEITWGGGANNSWHHNQHPVQNDTWASVQRTDG 878
             + ++ GG      +N W G   N  +N I       +S    ++     T A+  R+D 
Sbjct: 316  SMGFKQGGDLG---NNPWGG---NHWDNSIYKQKNVFDSHSPWKYCAFQGTEAAKDRSDS 369

Query: 879  SVKETGWGSNRNSYGRHGYVSTSRGSRAPSRQRGDYRHTSFGREQWHDGSGWESNVSCRK 1058
              K  GW    N             +  P +     R  S G   W+ G        CRK
Sbjct: 370  GDKSQGWKQWENH------------NNEPKKLES--RKVSGGWGVWNGG--------CRK 407

Query: 1059 REGPQQYASHYKSARLQSDDYREGN 1133
            REG  +  S YK +R+Q D Y+ G+
Sbjct: 408  REGSHKNTSSYKCSRVQGDSYQTGH 432


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