BLASTX nr result

ID: Atractylodes22_contig00029518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029518
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subun...   189   3e-46
sp|Q96542.1|RBS_BETVE RecName: Full=Ribulose bisphosphate carbox...   173   1e-41
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun...   172   2e-41
emb|CAA10290.1| ribulose 1,5-bisphosphate carboxylase small subu...   172   2e-41
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox...   172   3e-41

>gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subunit [Jatropha
           curcas]
          Length = 181

 Score =  189 bits (479), Expect = 3e-46
 Identities = 85/96 (88%), Positives = 90/96 (93%)
 Frame = -2

Query: 290 IASNGGRVSCMKVWPTEGVKKFETLSYLPPLTREQLLKEVEYLLRSNLIPCLEFELKDGF 111
           IA NGGRV CMKVWPT+G+KKFETLSYLPPLTREQL KEVEYLLRS  +PCLEFEL+ GF
Sbjct: 49  IAGNGGRVQCMKVWPTQGLKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGF 108

Query: 110 VYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVVNE 3
           VYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQV+NE
Sbjct: 109 VYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNE 144


>sp|Q96542.1|RBS_BETVE RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|1536889|emb|CAA69102.1|
           ribulose-bisphosphate carboxylase [Betula pendula]
          Length = 182

 Score =  173 bits (439), Expect = 1e-41
 Identities = 78/96 (81%), Positives = 86/96 (89%)
 Frame = -2

Query: 290 IASNGGRVSCMKVWPTEGVKKFETLSYLPPLTREQLLKEVEYLLRSNLIPCLEFELKDGF 111
           IASNGGRV CM+VWP  G+KKFETLSYLPPL+ EQL KEV+YLLR NLIPCLEFEL+ GF
Sbjct: 50  IASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGF 109

Query: 110 VYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVVNE 3
           VYRE+NRSPGYYDGRYWTMWKLPMFGC D+ QV+ E
Sbjct: 110 VYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKE 145


>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus x
           domestica x Pyrus communis]
          Length = 179

 Score =  172 bits (437), Expect = 2e-41
 Identities = 77/96 (80%), Positives = 85/96 (88%)
 Frame = -2

Query: 290 IASNGGRVSCMKVWPTEGVKKFETLSYLPPLTREQLLKEVEYLLRSNLIPCLEFELKDGF 111
           IASNGGRV CM+VWP  G+KKFETLSYLPPL+ E L KEV+YLLR N +PCLEFEL+ GF
Sbjct: 47  IASNGGRVQCMQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGF 106

Query: 110 VYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVVNE 3
           VYRENNRSPGYYDGRYWTMWKLPMFGCTD+ QV+ E
Sbjct: 107 VYRENNRSPGYYDGRYWTMWKLPMFGCTDSSQVLKE 142


>emb|CAA10290.1| ribulose 1,5-bisphosphate carboxylase small subunit [Cicer
           arietinum]
          Length = 181

 Score =  172 bits (437), Expect = 2e-41
 Identities = 78/96 (81%), Positives = 85/96 (88%)
 Frame = -2

Query: 290 IASNGGRVSCMKVWPTEGVKKFETLSYLPPLTREQLLKEVEYLLRSNLIPCLEFELKDGF 111
           IASNGGRV CM+VWP  G KKFETLSYLPPLT EQLLKEVEYLLR   +PCLEFEL+ GF
Sbjct: 49  IASNGGRVHCMQVWPPIGKKKFETLSYLPPLTEEQLLKEVEYLLRKGWVPCLEFELEKGF 108

Query: 110 VYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVVNE 3
           VYRE+N SPGYYDGRYWTMWKLP+FGCT+AVQV+ E
Sbjct: 109 VYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKE 144


>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Aralia elata]
          Length = 183

 Score =  172 bits (435), Expect = 3e-41
 Identities = 76/96 (79%), Positives = 86/96 (89%)
 Frame = -2

Query: 290 IASNGGRVSCMKVWPTEGVKKFETLSYLPPLTREQLLKEVEYLLRSNLIPCLEFELKDGF 111
           + SNGGRV CMKVWP  G+KKFETLSYLPPLT E+L KEV+YLLRS  +PCLEFEL+ G+
Sbjct: 49  LPSNGGRVQCMKVWPPLGLKKFETLSYLPPLTNEELAKEVDYLLRSGWVPCLEFELEHGW 108

Query: 110 VYRENNRSPGYYDGRYWTMWKLPMFGCTDAVQVVNE 3
           VYREN+RSPGYYDGRYWTMWKLPMFGCTD+ QV+NE
Sbjct: 109 VYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLNE 144


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