BLASTX nr result

ID: Atractylodes22_contig00029468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029468
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vi...    62   4e-08
ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vi...    62   4e-08
emb|CBI40960.3| unnamed protein product [Vitis vinifera]               62   4e-08
emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]    62   4e-08
ref|XP_002329162.1| tir-nbs-lrr resistance protein [Populus tric...    62   5e-08

>ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1250

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 43/100 (43%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
 Frame = -2

Query: 290  NGTAIKKIPSFICSMSNLQVLSVAHCGAAQSKWWASIFRQSLMKIHHPPSSVF--PSFTG 117
            +G+A+ + PS I  + NL+VLS   C  + S  W S F   L       S+ F  PS +G
Sbjct: 823  DGSAVIQPPSSIVLLRNLKVLSFQGCNGSPSSRWNSRFWSMLCLRRISDSTGFRLPSLSG 882

Query: 116  LRMLKRLDASHCNISE-ITPNSISG-LSCLEQLNLGGNNF 3
            L  LK+L+ S CNI E   PN + G LS LE LNL GN+F
Sbjct: 883  LCSLKQLNLSDCNIKEGALPNDLGGYLSSLEYLNLKGNDF 922


>ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1233

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
 Frame = -2

Query: 290  NGTAIKKIPSFICSMSNLQVLSVAHCGAAQSKWWASIFRQSLM--KIHHPPSSVFPSFTG 117
            +GT +++ PS I  + NL++LS   C    S  W+S+F   L+  K         PS +G
Sbjct: 806  DGTLVRQPPSSIVLLRNLEILSFGGCKGLASNSWSSLFSFWLLPRKSSDTIGLQLPSLSG 865

Query: 116  LRMLKRLDASHCNISE-ITPNSISGLSCLEQLNLGGNNF 3
            L  L+ LD S CN+ E   P  I  LS LE LNL  NNF
Sbjct: 866  LCSLRELDISDCNLMEGAVPFDICNLSSLETLNLSRNNF 904


>emb|CBI40960.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 43/100 (43%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
 Frame = -2

Query: 290 NGTAIKKIPSFICSMSNLQVLSVAHCGAAQSKWWASIFRQSLMKIHHPPSSVF--PSFTG 117
           +G+A+ + PS I  + NL+VLS   C  + S  W S F   L       S+ F  PS +G
Sbjct: 329 DGSAVIQPPSSIVLLRNLKVLSFQGCNGSPSSRWNSRFWSMLCLRRISDSTGFRLPSLSG 388

Query: 116 LRMLKRLDASHCNISE-ITPNSISG-LSCLEQLNLGGNNF 3
           L  LK+L+ S CNI E   PN + G LS LE LNL GN+F
Sbjct: 389 LCSLKQLNLSDCNIKEGALPNDLGGYLSSLEYLNLKGNDF 428


>emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]
          Length = 1244

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
 Frame = -2

Query: 290  NGTAIKKIPSFICSMSNLQVLSVAHCGAAQSKWWASIFRQSLM--KIHHPPSSVFPSFTG 117
            +GT +++ PS I  + NL++LS   C    S  W+S+F   L+  K         PS +G
Sbjct: 774  DGTLVRQPPSSIVLLRNLEILSFGGCKGLASNSWSSLFSFWLLPRKSSDTIGLQLPSLSG 833

Query: 116  LRMLKRLDASHCNISE-ITPNSISGLSCLEQLNLGGNNF 3
            L  L+ LD S CN+ E   P  I  LS LE LNL  NNF
Sbjct: 834  LCSLRELDISDCNLMEGAVPFDICNLSSLETLNLSRNNF 872


>ref|XP_002329162.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222870943|gb|EEF08074.1| tir-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1203

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 40/102 (39%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
 Frame = -2

Query: 293  INGTAIKKIPSFICSMSNLQVLSVAHCGAAQSK----WWASIFRQSLMKIHHPPSSVFPS 126
            ++GTAI++ P  I S+ NL++LS   C  +       W   +F     K  +  S V PS
Sbjct: 815  VSGTAIREPPVSIFSLKNLKILSFHGCAESSRSTTNIWQRLMFPLMPGKRANSTSLVLPS 874

Query: 125  FTGLRMLKRLDASHCNISE-ITPNSISGLSCLEQLNLGGNNF 3
             +GL  L RL  S+CN+ E   PN I  LS L QLNL  N F
Sbjct: 875  LSGLSSLTRLGLSNCNLGEGAVPNDIGYLSSLRQLNLSRNKF 916


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