BLASTX nr result

ID: Atractylodes22_contig00029458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029458
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267902.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR...   178   5e-43
ref|XP_002512671.1| zinc finger protein, putative [Ricinus commu...   174   7e-42
emb|CBI29262.3| unnamed protein product [Vitis vinifera]              172   3e-41
gb|ADR79442.1| VARIANT IN METHYLATION-like protein [Liriodendron...   168   5e-40
gb|ADR79438.1| VARIANT IN METHYLATION-like protein [Liriodendron...   168   5e-40

>ref|XP_002267902.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Vitis
           vinifera]
          Length = 815

 Score =  178 bits (451), Expect = 5e-43
 Identities = 91/167 (54%), Positives = 106/167 (63%), Gaps = 14/167 (8%)
 Frame = +3

Query: 3   LPCDGDGRCMICKINPPEEETLTCKTCITPWHLNCLSARPQTL--------ADAAQWECP 158
           LPCDGDG CMIC+  P ++E++TCKTC TPWH+ CLS RP+TL        ADA QWECP
Sbjct: 7   LPCDGDGVCMICRRKPSDDESITCKTCATPWHVTCLSVRPETLADALQWQVADALQWECP 66

Query: 159 DCSNLVSSNPAP-----ATVTSGSEPSATLIAAIRAIESDASLSDQEKAKXXXXXXXXXX 323
           DCS  V     P     A    GSE S  LIAAIRAIESD SL++QEKAK          
Sbjct: 67  DCSPAVGERDPPEVSETAVAAGGSEGSGDLIAAIRAIESDGSLTEQEKAKRRQELLSGTV 126

Query: 324 XXXXXKP-TDDKKEIGGNDVLKLLSGSFNCSFCMQLPERPVTTPCGH 461
                +  + +K++ GG DVL +L GS NCS CMQL ERPVTTPCGH
Sbjct: 127 RSGSPEEGSPNKRKNGGRDVLDILDGSLNCSVCMQLLERPVTTPCGH 173


>ref|XP_002512671.1| zinc finger protein, putative [Ricinus communis]
           gi|223548632|gb|EEF50123.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 735

 Score =  174 bits (441), Expect = 7e-42
 Identities = 86/154 (55%), Positives = 103/154 (66%), Gaps = 1/154 (0%)
 Frame = +3

Query: 3   LPCDGDGRCMICKINPPEEETLTCKTCITPWHLNCLSARPQTLADAAQWECPDCSNLVSS 182
           LPCDGDG CMICK  P  +++LTC+TC TPWHL CLS+ P+T ADA QW CPDCS L   
Sbjct: 7   LPCDGDGICMICKTKPSPDDSLTCRTCDTPWHLTCLSSPPETSADALQWNCPDCSIL--- 63

Query: 183 NPAPATVTSGSE-PSATLIAAIRAIESDASLSDQEKAKXXXXXXXXXXXXXXXKPTDDKK 359
           NP   T++ GSE  S+ LIAAIR IESD SLS+ EKAK                  + ++
Sbjct: 64  NP---TLSRGSEATSSALIAAIRMIESDVSLSESEKAKRRQQLVSGGAPSCSGVEEEKER 120

Query: 360 EIGGNDVLKLLSGSFNCSFCMQLPERPVTTPCGH 461
             G N++L +L   FNCSFCMQLP+RPVTTPCGH
Sbjct: 121 ITGSNEILDILDAGFNCSFCMQLPDRPVTTPCGH 154


>emb|CBI29262.3| unnamed protein product [Vitis vinifera]
          Length = 803

 Score =  172 bits (435), Expect = 3e-41
 Identities = 88/162 (54%), Positives = 103/162 (63%), Gaps = 9/162 (5%)
 Frame = +3

Query: 3   LPCDGDGRCMICKINPPEEETLTCKTCITPWHLNCLSARPQTL--------ADAAQWECP 158
           LPCDGDG CMIC+  P ++E++TCKTC TPWH+ CLS RP+TL        ADA QWECP
Sbjct: 7   LPCDGDGVCMICRRKPSDDESITCKTCATPWHVTCLSVRPETLADALQWQVADALQWECP 66

Query: 159 DCSNLVSSNPAPATVTSGSEPSATLIAAIRAIESDASLSDQEKAKXXXXXXXXXXXXXXX 338
           DCS  V     P       E S  LIAAIRAIESD SL++QEKAK               
Sbjct: 67  DCSPAVGERDPP-------EGSGDLIAAIRAIESDGSLTEQEKAKRRQELLSGTVRSGSP 119

Query: 339 KP-TDDKKEIGGNDVLKLLSGSFNCSFCMQLPERPVTTPCGH 461
           +  + +K++ GG DVL +L GS NCS CMQL ERPVTTPCGH
Sbjct: 120 EEGSPNKRKNGGRDVLDILDGSLNCSVCMQLLERPVTTPCGH 161


>gb|ADR79442.1| VARIANT IN METHYLATION-like protein [Liriodendron tulipifera]
          Length = 713

 Score =  168 bits (425), Expect = 5e-40
 Identities = 85/154 (55%), Positives = 102/154 (66%), Gaps = 1/154 (0%)
 Frame = +3

Query: 3   LPCDGDGRCMICKINPPEEETLTCKTCITPWHLNCLSARPQTLADAAQWECPDCSNLVSS 182
           LPCDGDG CM+CK +P +EE L C TC TPWH+ CLS+ PQ+L+   QW CPDCS   S 
Sbjct: 7   LPCDGDGICMLCKKSPSDEEKLLCNTCATPWHVPCLSSPPQSLSSTLQWNCPDCSPAPSV 66

Query: 183 NPAPATVTSGSEPSATLIAAIRAIESDASLSDQEKAKXXXXXXXXXXXXXXXKPTDDKKE 362
           +  PA   +GS  S  LI+A+RAIE+D SL+D+EKA+                  + K+E
Sbjct: 67  DSKPAPSVAGS-LSNDLISAVRAIEADESLNDEEKAR-RRQELMSGGARSSGDGDEKKRE 124

Query: 363 IGGN-DVLKLLSGSFNCSFCMQLPERPVTTPCGH 461
            GGN  VL LL GS NCSFCMQLPERPVTTPCGH
Sbjct: 125 KGGNGGVLDLLDGSLNCSFCMQLPERPVTTPCGH 158


>gb|ADR79438.1| VARIANT IN METHYLATION-like protein [Liriodendron tulipifera]
          Length = 713

 Score =  168 bits (425), Expect = 5e-40
 Identities = 85/154 (55%), Positives = 102/154 (66%), Gaps = 1/154 (0%)
 Frame = +3

Query: 3   LPCDGDGRCMICKINPPEEETLTCKTCITPWHLNCLSARPQTLADAAQWECPDCSNLVSS 182
           LPCDGDG CM+CK +P +EE L C TC TPWH+ CLS+ PQ+L+   QW CPDCS   S 
Sbjct: 7   LPCDGDGICMLCKKSPSDEEKLLCNTCATPWHVPCLSSPPQSLSSTLQWNCPDCSPAPSV 66

Query: 183 NPAPATVTSGSEPSATLIAAIRAIESDASLSDQEKAKXXXXXXXXXXXXXXXKPTDDKKE 362
           +  PA   +GS  S  LI+A+RAIE+D SL+D+EKA+                  + K+E
Sbjct: 67  DSKPAPSVAGS-LSNDLISAVRAIEADESLNDEEKAR-RRQELMSGGARSSGDGDEKKRE 124

Query: 363 IGGN-DVLKLLSGSFNCSFCMQLPERPVTTPCGH 461
            GGN  VL LL GS NCSFCMQLPERPVTTPCGH
Sbjct: 125 KGGNGGVLDLLDGSLNCSFCMQLPERPVTTPCGH 158


Top