BLASTX nr result

ID: Atractylodes22_contig00029452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029452
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADR71236.1| 60S acidic ribosomal protein P0B [Hevea brasilien...    55   7e-13
ref|XP_003538454.1| PREDICTED: 60S acidic ribosomal protein P0-l...    57   2e-12
gb|ADR71235.1| 60S acidic ribosomal protein P0A [Hevea brasilien...    53   2e-12
gb|AFK39880.1| unknown [Medicago truncatula]                           55   3e-12
gb|ACJ84880.1| unknown [Medicago truncatula]                           55   3e-12

>gb|ADR71236.1| 60S acidic ribosomal protein P0B [Hevea brasiliensis]
          Length = 320

 Score = 54.7 bits (130), Expect(2) = 7e-13
 Identities = 29/42 (69%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
 Frame = +3

Query: 378 TKMQKKMNYDARLSNLLDHYMQIL-VGVDNVGSNLLQNIRQG 500
           +K  KKM YDA+L  LLD Y QIL V  DNVGSN LQNIRQG
Sbjct: 6   SKADKKMAYDAKLCQLLDEYSQILIVAADNVGSNQLQNIRQG 47



 Score = 44.7 bits (104), Expect(2) = 7e-13
 Identities = 19/26 (73%), Positives = 24/26 (92%)
 Frame = +2

Query: 503 ESTMMKRTIRLHAERTGNTEILNLIP 580
           ++TMMKRTIR+H+E+TGNT  LNLIP
Sbjct: 58  KNTMMKRTIRVHSEKTGNTAFLNLIP 83


>ref|XP_003538454.1| PREDICTED: 60S acidic ribosomal protein P0-like [Glycine max]
          Length = 320

 Score = 56.6 bits (135), Expect(2) = 2e-12
 Identities = 30/43 (69%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
 Frame = +3

Query: 375 LTKMQKKMNYDARLSNLLDHYMQIL-VGVDNVGSNLLQNIRQG 500
           LTK QKK+ YDA+L  LLD+Y QIL V  DNVGSN LQNIR G
Sbjct: 5   LTKAQKKIAYDAKLCKLLDNYTQILVVAADNVGSNQLQNIRHG 47



 Score = 41.2 bits (95), Expect(2) = 2e-12
 Identities = 17/26 (65%), Positives = 24/26 (92%)
 Frame = +2

Query: 503 ESTMMKRTIRLHAERTGNTEILNLIP 580
           ++TMMKR+I++HA+ TG+T ILNLIP
Sbjct: 58  KNTMMKRSIKIHAQNTGDTTILNLIP 83


>gb|ADR71235.1| 60S acidic ribosomal protein P0A [Hevea brasiliensis]
          Length = 320

 Score = 53.1 bits (126), Expect(2) = 2e-12
 Identities = 28/42 (66%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
 Frame = +3

Query: 378 TKMQKKMNYDARLSNLLDHYMQIL-VGVDNVGSNLLQNIRQG 500
           +K  KK+ YDA+L  LLD Y QIL V  DNVGSN LQNIRQG
Sbjct: 6   SKADKKIAYDAKLCQLLDEYSQILIVAADNVGSNQLQNIRQG 47



 Score = 44.7 bits (104), Expect(2) = 2e-12
 Identities = 19/26 (73%), Positives = 24/26 (92%)
 Frame = +2

Query: 503 ESTMMKRTIRLHAERTGNTEILNLIP 580
           ++TMMKRTIR+H+E+TGNT  LNLIP
Sbjct: 58  KNTMMKRTIRVHSEKTGNTAFLNLIP 83


>gb|AFK39880.1| unknown [Medicago truncatula]
          Length = 323

 Score = 55.1 bits (131), Expect(2) = 3e-12
 Identities = 28/42 (66%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
 Frame = +3

Query: 378 TKMQKKMNYDARLSNLLDHYMQIL-VGVDNVGSNLLQNIRQG 500
           TK +KK NYDA+L  L+D Y QIL V  DNVGS  LQNIRQG
Sbjct: 6   TKAEKKQNYDAKLCQLIDEYTQILVVNADNVGSKQLQNIRQG 47



 Score = 42.4 bits (98), Expect(2) = 3e-12
 Identities = 17/26 (65%), Positives = 23/26 (88%)
 Frame = +2

Query: 503 ESTMMKRTIRLHAERTGNTEILNLIP 580
           ++TMMKR++R+HAE+TGN   LNLIP
Sbjct: 58  KNTMMKRSVRMHAEKTGNNAFLNLIP 83


>gb|ACJ84880.1| unknown [Medicago truncatula]
          Length = 323

 Score = 55.1 bits (131), Expect(2) = 3e-12
 Identities = 28/42 (66%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
 Frame = +3

Query: 378 TKMQKKMNYDARLSNLLDHYMQIL-VGVDNVGSNLLQNIRQG 500
           TK +KK NYDA+L  L+D Y QIL V  DNVGS  LQNIRQG
Sbjct: 6   TKAEKKQNYDAKLCQLIDEYTQILVVNADNVGSKQLQNIRQG 47



 Score = 42.4 bits (98), Expect(2) = 3e-12
 Identities = 17/26 (65%), Positives = 23/26 (88%)
 Frame = +2

Query: 503 ESTMMKRTIRLHAERTGNTEILNLIP 580
           ++TMMKR++R+HAE+TGN   LNLIP
Sbjct: 58  KNTMMKRSVRMHAEKTGNNAFLNLIP 83