BLASTX nr result

ID: Atractylodes22_contig00029409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029409
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593000.1| Serine hydroxymethyltransferase [Medicago tr...    94   5e-17
ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1...    86   7e-15
ref|XP_004163889.1| PREDICTED: serine hydroxymethyltransferase 1...    84   4e-14
ref|XP_004146284.1| PREDICTED: serine hydroxymethyltransferase 1...    84   4e-14
ref|NP_564473.1| serine hydroxymethyltransferase 7 [Arabidopsis ...    77   4e-12

>ref|XP_003593000.1| Serine hydroxymethyltransferase [Medicago truncatula]
           gi|355482048|gb|AES63251.1| Serine
           hydroxymethyltransferase [Medicago truncatula]
          Length = 593

 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 69/173 (39%), Positives = 93/173 (53%), Gaps = 8/173 (4%)
 Frame = -2

Query: 496 MDLTRAPQSNLSLGFVPHSSHSNQ-----IANDTVSFQIDSSFRNPPNHLVSGVPLQLME 332
           MDL+   QSNLSL F   SSH++      I +D+++  ++SSFR+P N  V  VPLQLME
Sbjct: 1   MDLSHH-QSNLSLNF--SSSHASPPPRPPIPDDSIALHLESSFRDPSNP-VPTVPLQLME 56

Query: 331 QQTATENKN-VDLNEKHQQTNAGSMDLNXXXXXXXXXXXXXXXXXXRILGHSMCLKRRRD 155
            QT  EN N +D+   + + +    +                     ILGHSMC+KRRRD
Sbjct: 57  PQTEKENGNAIDIESNNDEDDREVEEFR-------------------ILGHSMCIKRRRD 97

Query: 154 NNSSCATTDSACSNTLSKRCHTEQNRQGQ--SLESRRQSVRAWGNQSLQAADP 2
           + SS  TT         KR   E +R  +   LESR+ +VR+WG+Q LQ ADP
Sbjct: 98  SESSTITT---------KRASVESDRGDRLLDLESRKAAVRSWGDQPLQVADP 141


>ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1-like [Vitis vinifera]
          Length = 577

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 65/170 (38%), Positives = 84/170 (49%), Gaps = 5/170 (2%)
 Frame = -2

Query: 496 MDLTRAPQSNLSLGFVPHSSHSNQIANDTVSFQIDSSFRNPPNHLVSGVPLQLMEQQTAT 317
           MDL  +  SNLSLGF   SS S QIA+D+++FQIDSSFR   N + +  PLQL+E+    
Sbjct: 1   MDLNSS--SNLSLGF--SSSSSVQIADDSIAFQIDSSFRESTNPMPTA-PLQLLEENHRG 55

Query: 316 EN-----KNVDLNEKHQQTNAGSMDLNXXXXXXXXXXXXXXXXXXRILGHSMCLKRRRDN 152
           EN     ++ D  EK ++                            ILGHSMCLKRRRD 
Sbjct: 56  ENGGGGGESADEEEKVEEFR--------------------------ILGHSMCLKRRRDG 89

Query: 151 NSSCATTDSACSNTLSKRCHTEQNRQGQSLESRRQSVRAWGNQSLQAADP 2
             +C+                 ++     LE+RR +VRAWGNQ L  ADP
Sbjct: 90  EVTCSA--------------VRRDPMEAELEARRSAVRAWGNQRLCVADP 125


>ref|XP_004163889.1| PREDICTED: serine hydroxymethyltransferase 1-like [Cucumis sativus]
          Length = 585

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 63/165 (38%), Positives = 84/165 (50%)
 Frame = -2

Query: 496 MDLTRAPQSNLSLGFVPHSSHSNQIANDTVSFQIDSSFRNPPNHLVSGVPLQLMEQQTAT 317
           MDL+ + QSN+S G V    H  QIA+D++   +DSS R  P +    VPLQLME QT  
Sbjct: 1   MDLSNS-QSNISRGRVS-PPHRTQIADDSILLHLDSS-RRGPTYSAPPVPLQLMEPQTEN 57

Query: 316 ENKNVDLNEKHQQTNAGSMDLNXXXXXXXXXXXXXXXXXXRILGHSMCLKRRRDNNSSCA 137
            +++ + + K         D+                    ILGHSMCLKRRRD  SS  
Sbjct: 58  -HRDENGDAKRDDDECDDRDVEEFR----------------ILGHSMCLKRRRDGESS-- 98

Query: 136 TTDSACSNTLSKRCHTEQNRQGQSLESRRQSVRAWGNQSLQAADP 2
              S   +T    C  +       +E+RR SVR+WGNQ+L+AADP
Sbjct: 99  ---SLLGSTKRVSCEFD-------METRRSSVRSWGNQTLRAADP 133


>ref|XP_004146284.1| PREDICTED: serine hydroxymethyltransferase 1-like [Cucumis sativus]
          Length = 585

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 63/165 (38%), Positives = 84/165 (50%)
 Frame = -2

Query: 496 MDLTRAPQSNLSLGFVPHSSHSNQIANDTVSFQIDSSFRNPPNHLVSGVPLQLMEQQTAT 317
           MDL+ + QSN+S G V    H  QIA+D++   +DSS R  P +    VPLQLME QT  
Sbjct: 1   MDLSNS-QSNISRGRVS-PPHRTQIADDSILLHLDSS-RRGPTYSAPPVPLQLMEPQTEN 57

Query: 316 ENKNVDLNEKHQQTNAGSMDLNXXXXXXXXXXXXXXXXXXRILGHSMCLKRRRDNNSSCA 137
            +++ + + K         D+                    ILGHSMCLKRRRD  SS  
Sbjct: 58  -HRDENGDAKRDDDECDDRDVEEFR----------------ILGHSMCLKRRRDGESS-- 98

Query: 136 TTDSACSNTLSKRCHTEQNRQGQSLESRRQSVRAWGNQSLQAADP 2
              S   +T    C  +       +E+RR SVR+WGNQ+L+AADP
Sbjct: 99  ---SLLGSTKRVSCEFD-------METRRSSVRSWGNQTLRAADP 133


>ref|NP_564473.1| serine hydroxymethyltransferase 7 [Arabidopsis thaliana]
           gi|27754227|gb|AAO22567.1| putative
           hydroxymethyltransferase [Arabidopsis thaliana]
           gi|332193741|gb|AEE31862.1| serine
           hydroxymethyltransferase 7 [Arabidopsis thaliana]
          Length = 598

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 60/173 (34%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
 Frame = -2

Query: 496 MDLTRAPQSNLSLGF-------VPHSSHSNQIANDTVSFQIDSSFRNPPNHLVSGVPLQL 338
           MDL+R+ Q+N  LGF        P  +    IA+D+++ Q+D SFR+ P    S +PLQL
Sbjct: 1   MDLSRS-QTNFQLGFGCSHASMTPTPTPRAPIADDSINLQVDQSFRSLPTTF-SPIPLQL 58

Query: 337 MEQQTATENKNVDLNEKHQQTNAGSMDLNXXXXXXXXXXXXXXXXXXRILGHSMCLKRRR 158
           +EQ+     K   ++E  +    G                       RILGH MCLKR+R
Sbjct: 59  LEQKA---EKTTTVDEPKKDGGGGG--------------DQKEDEHFRILGHHMCLKRQR 101

Query: 157 DNNSSCATTDSACSNTLSKRCHTEQNRQGQS-LESRRQSVRAWGNQSLQAADP 2
           D           C   L++  H +++  G S LESRR +VRAWG+Q +  ADP
Sbjct: 102 D-----------CPLLLTQSKHPKRSSIGDSDLESRRAAVRAWGDQPIHLADP 143


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