BLASTX nr result

ID: Atractylodes22_contig00029393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029393
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_003609004.1| F-box/kelch-repeat protein [Medicago truncat...    77   3e-12
ref|XP_003608998.1| F-box protein [Medicago truncatula] gi|35551...    77   3e-12
ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    75   7e-12
ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis...    75   1e-11

>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 52/138 (37%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
 Frame = +2

Query: 107 LCEELIAEIFGRLPPKSLLRFRCLSKSWCSRIVSPDFIRMHARLSTQKILIKHRPSFFGN 286
           L  E+ A+I  RLP KSL RFRC+SKSWC  I SP FI  H + S+Q     H       
Sbjct: 3   LFPEITADILSRLPVKSLKRFRCVSKSWCKEIDSPYFINTHLKRSSQ----AHTHLNLIL 58

Query: 287 YNQGDFCTLHYEDRLPLSPTPGYMGITPIKFPEYSPMTKFPGYSSDVIGSCNGVLCLFNG 466
            +  + CT+  +       +P +  I     P      K    +++V+GSCNG+L L N 
Sbjct: 59  RDATNLCTVDLD-------SPDFTSIELKNNP-----LKSDDCATEVMGSCNGLLALLNS 106

Query: 467 -FSITLWNPSVHRKLDVP 517
            FSI L+NPS   K  +P
Sbjct: 107 DFSIALYNPSTREKKMIP 124


>ref|XP_003609004.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355510059|gb|AES91201.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 515

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 50/144 (34%), Positives = 66/144 (45%)
 Frame = +2

Query: 74  FTVPNYTMTDYLCEELIAEIFGRLPPKSLLRFRCLSKSWCSRIVSPDFIRMHARLSTQKI 253
           FT     +T  + EE+I EI  RLP +SLL+FRC+ K W + I  P F + H  +ST   
Sbjct: 25  FTQSVSEITADMPEEIIVEILLRLPVRSLLQFRCVCKLWKTLISDPQFAKKHVSISTA-- 82

Query: 254 LIKHRPSFFGNYNQGDFCTLHYEDRLPLSPTPGYMGITPIKFPEYSPMTKFPGYSSDVIG 433
                P     +     C L      PL   P    + P  F            S  +IG
Sbjct: 83  ----YPQLVSVFVSIAKCNLVSYPLKPLLDNPSAHRVEPADFEMIHTT------SMTIIG 132

Query: 434 SCNGVLCLFNGFSITLWNPSVHRK 505
           SCNG+LCL + +  TLWNPS+  K
Sbjct: 133 SCNGLLCLSDFYQFTLWNPSIKLK 156


>ref|XP_003608998.1| F-box protein [Medicago truncatula] gi|355510053|gb|AES91195.1|
           F-box protein [Medicago truncatula]
          Length = 607

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 50/144 (34%), Positives = 66/144 (45%)
 Frame = +2

Query: 74  FTVPNYTMTDYLCEELIAEIFGRLPPKSLLRFRCLSKSWCSRIVSPDFIRMHARLSTQKI 253
           FT     +T  + EE+I EI  RLP +SLL+FRC+ K W + I  P F + H  +ST   
Sbjct: 25  FTQSVSEITADMPEEIIVEILLRLPVRSLLQFRCVCKLWKTLISDPQFAKKHVSISTA-- 82

Query: 254 LIKHRPSFFGNYNQGDFCTLHYEDRLPLSPTPGYMGITPIKFPEYSPMTKFPGYSSDVIG 433
                P     +     C L      PL   P    + P  F            S  +IG
Sbjct: 83  ----YPQLVSVFVSIAKCNLVSYPLKPLLDNPSAHRVEPADFEMIHTT------SMTIIG 132

Query: 434 SCNGVLCLFNGFSITLWNPSVHRK 505
           SCNG+LCL + +  TLWNPS+  K
Sbjct: 133 SCNGLLCLSDFYQFTLWNPSIKLK 156


>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score = 75.1 bits (183), Expect = 7e-12
 Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 14/155 (9%)
 Frame = +2

Query: 95  MTDYLCEELIAEIFGRLPPKSLLRFRCLSKSWCSRIVSPDFIRMHARLSTQK-----ILI 259
           M D++ +E++ +IF RLP K LLR RC+ K+W S I + +FI  H+R +        +++
Sbjct: 1   MLDHIPKEVLIKIFLRLPVKQLLRCRCICKTWYSLISNHNFISTHSRYTIDSNNNNYLIL 60

Query: 260 KHRPSFFGNYNQGDFCTLHYEDRLPLSPTPGYMGITPIKFPEYSPMTKFPGYSS----DV 427
           +H    +   N+ +   LH++D                 F EY  +  FP  SS    ++
Sbjct: 61  RH----YSRSNKKERFALHFDD--------------DDMFSEYQEL-DFPLESSWDYFEI 101

Query: 428 IGSCNGVLCLFNGFS-----ITLWNPSVHRKLDVP 517
           +GSCNG++CL +  S     I LWNPS+   + +P
Sbjct: 102 VGSCNGIICLTDNHSHILKRIVLWNPSIGLSVTLP 136


>ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449531147|ref|XP_004172549.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 379

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
 Frame = +2

Query: 95  MTDYLCEELIAEIFGRLPPKSLLRFRCLSKSWCSRIVSPDFIRMHARLS---TQKILIKH 265
           M+ YL  E++  IF  LPPK+L+   C+SKSW S + +P FI  H   S    +K+LI  
Sbjct: 1   MSGYLPHEVLFNIFLNLPPKTLILCSCVSKSWRSVVANPIFISTHRNQSLTCNRKLLILG 60

Query: 266 RPSFFGNYNQGDFCTLHYE-DRLPLSPTPGYMGITPIKFPEYSPMTKFPGYSSD--VIGS 436
           R  ++         +LH++ D L L           +KFP       FP  + D  ++G 
Sbjct: 61  R-YYYNRTEPKVRYSLHFDTDTLDL--------YQELKFP-------FPNSNGDLKIVGV 104

Query: 437 CNGVLCLFNGFSITLWNPSVHRKLDVPHNS 526
            NG++C F G  + LWNPS+ R +DVP  S
Sbjct: 105 SNGLVC-FLGLDLLLWNPSIQRVVDVPRTS 133


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