BLASTX nr result

ID: Atractylodes22_contig00029379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029379
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19025.3| unnamed protein product [Vitis vinifera]              127   1e-27
ref|XP_002513802.1| androgen induced inhibitor of proliferation ...    97   2e-18
ref|NP_001185421.1| sister chromatid cohesion protein PDS5 [Arab...    92   4e-17
ref|NP_001185420.1| sister chromatid cohesion protein PDS5 [Arab...    92   4e-17
ref|NP_001119390.1| sister chromatid cohesion protein PDS5 [Arab...    90   2e-16

>emb|CBI19025.3| unnamed protein product [Vitis vinifera]
          Length = 1450

 Score =  127 bits (318), Expect = 1e-27
 Identities = 68/130 (52%), Positives = 90/130 (69%)
 Frame = +1

Query: 4    EVTRYIDENIFLLKEVGMFDDLVSSHDTSEGFTSCKLKIFGLKTLVKSFMPHQRGGVTRP 183
            E+T YI+E  F   +V   D+L S  +TSE  +SCKLKI+ LK LV+SF+PH+   V R 
Sbjct: 762  EITSYINETFF---QVEPLDNLASFDETSECSSSCKLKIYALKALVRSFLPHRGTHVKRQ 818

Query: 184  IDEILGIISQMLQTTKVSEGTLSGETDMEHLRLAAATSVLRLSQIWDPHISPHIYRLTVL 363
            I+++L I+S+ML    +S  T S E D  H+RLAAA SVLRL+  WD HISPHI+R T+L
Sbjct: 819  INDLLDIMSEMLPKGDISYDTGSCENDEAHIRLAAAKSVLRLAGRWDLHISPHIFRSTIL 878

Query: 364  TAKDHSPMVR 393
             AKD SP++R
Sbjct: 879  VAKDPSPLIR 888


>ref|XP_002513802.1| androgen induced inhibitor of proliferation (as3) / pds5, putative
            [Ricinus communis] gi|223546888|gb|EEF48385.1| androgen
            induced inhibitor of proliferation (as3) / pds5, putative
            [Ricinus communis]
          Length = 1332

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/86 (55%), Positives = 63/86 (73%)
 Frame = +1

Query: 115  KIFGLKTLVKSFMPHQRGGVTRPIDEILGIISQMLQTTKVSEGTLSGETDMEHLRLAAAT 294
            +I+G+KTLVKSF+PHQ   V R IDE+L I+ ++LQT    +G ++   D  H+RLAAA 
Sbjct: 784  QIYGVKTLVKSFLPHQGSHVNRQIDELLDILLKLLQTGDAIDGIITCVNDKPHVRLAAAK 843

Query: 295  SVLRLSQIWDPHISPHIYRLTVLTAK 372
            SVLRLS+ WD HISP I+R T+L AK
Sbjct: 844  SVLRLSRRWDLHISPEIFRSTILVAK 869


>ref|NP_001185421.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana]
            gi|332197878|gb|AEE35999.1| sister chromatid cohesion
            protein PDS5 [Arabidopsis thaliana]
          Length = 1424

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 54/130 (41%), Positives = 81/130 (62%)
 Frame = +1

Query: 1    DEVTRYIDENIFLLKEVGMFDDLVSSHDTSEGFTSCKLKIFGLKTLVKSFMPHQRGGVTR 180
            D +   I   I+ + +    D+ +    +S    SCKLKI+GLKTLVKSF+P + G V R
Sbjct: 804  DNIYEDITSYIYRVFQAEPSDNQLPCDQSSGCCNSCKLKIYGLKTLVKSFLP-RHGQVVR 862

Query: 181  PIDEILGIISQMLQTTKVSEGTLSGETDMEHLRLAAATSVLRLSQIWDPHISPHIYRLTV 360
             ID++L I+ + L++ +  +G  S E    ++RLAAA +VL LS+ WD HISP ++RLT+
Sbjct: 863  KIDDLLNILKKTLKS-QGHDGIKSCEDTGANVRLAAAKAVLLLSRKWDLHISPEVFRLTI 921

Query: 361  LTAKDHSPMV 390
            L AKD +  +
Sbjct: 922  LMAKDSNAFI 931


>ref|NP_001185420.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana]
            gi|332197877|gb|AEE35998.1| sister chromatid cohesion
            protein PDS5 [Arabidopsis thaliana]
          Length = 1410

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 54/130 (41%), Positives = 81/130 (62%)
 Frame = +1

Query: 1    DEVTRYIDENIFLLKEVGMFDDLVSSHDTSEGFTSCKLKIFGLKTLVKSFMPHQRGGVTR 180
            D +   I   I+ + +    D+ +    +S    SCKLKI+GLKTLVKSF+P + G V R
Sbjct: 790  DNIYEDITSYIYRVFQAEPSDNQLPCDQSSGCCNSCKLKIYGLKTLVKSFLP-RHGQVVR 848

Query: 181  PIDEILGIISQMLQTTKVSEGTLSGETDMEHLRLAAATSVLRLSQIWDPHISPHIYRLTV 360
             ID++L I+ + L++ +  +G  S E    ++RLAAA +VL LS+ WD HISP ++RLT+
Sbjct: 849  KIDDLLNILKKTLKS-QGHDGIKSCEDTGANVRLAAAKAVLLLSRKWDLHISPEVFRLTI 907

Query: 361  LTAKDHSPMV 390
            L AKD +  +
Sbjct: 908  LMAKDSNAFI 917


>ref|NP_001119390.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana]
            gi|332008170|gb|AED95553.1| sister chromatid cohesion
            protein PDS5 [Arabidopsis thaliana]
          Length = 1607

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 53/130 (40%), Positives = 75/130 (57%)
 Frame = +1

Query: 4    EVTRYIDENIFLLKEVGMFDDLVSSHDTSEGFTSCKLKIFGLKTLVKSFMPHQRGGVTRP 183
            EV  +I   I  LK   + D  +S  D SE    C+LKI+G+KTLVKS++P +   +   
Sbjct: 766  EVVEFIRSKILKLKSETVDDKKLSWDDKSE---ICQLKIYGIKTLVKSYLPFKDAQLRAG 822

Query: 184  IDEILGIISQMLQTTKVSEGTLSGETDMEHLRLAAATSVLRLSQIWDPHISPHIYRLTVL 363
            +D++LGI+  +L   +VSE   S   D  HLRLAAA +VLRLS+ WD  I   I+ LT+ 
Sbjct: 823  VDDLLGILKNILSFGEVSEDLESSSVDKAHLRLAAAKAVLRLSRHWDDKIPIEIFHLTLK 882

Query: 364  TAKDHSPMVR 393
            T +   P  +
Sbjct: 883  TPEIPFPTAK 892


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