BLASTX nr result

ID: Atractylodes22_contig00029370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029370
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267457.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mit...   167   1e-39
ref|NP_001077760.1| Class I peptide chain release factor [Arabid...   159   2e-37
ref|XP_004159510.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mit...   154   7e-36
ref|XP_004147947.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mit...   152   2e-35
ref|XP_002886449.1| translation release factor [Arabidopsis lyra...   151   5e-35

>ref|XP_002267457.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Vitis
           vinifera] gi|296082846|emb|CBI22147.3| unnamed protein
           product [Vitis vinifera]
          Length = 230

 Score =  167 bits (422), Expect = 1e-39
 Identities = 92/148 (62%), Positives = 109/148 (73%), Gaps = 1/148 (0%)
 Frame = -1

Query: 442 MAAIKTTATVLVREIFRPSPSPASIRTCCTLISSVPFPLRFISRPISYTAVRCAAASDSN 263
           MA I+ T  ++V+EIF  S S  S R    ++ +       ++R ISY+ +RCAAA   +
Sbjct: 1   MATIRCTTNMIVKEIFHVSLSLRSERMFQMVLPNFSVYCGTVNRGISYSRIRCAAADSGD 60

Query: 262 GGGNKKASARLSQVQQQLHEAMERSAG-GDEPIPKITLDHVTVSFARSGGPGGQNVNKVN 86
           GG  +K SARLSQVQQ L EA ERS   G+EP PKITLDHVTVSFARSGGPGGQNVNKVN
Sbjct: 61  GG--RKVSARLSQVQQLLQEAEERSLSFGNEPTPKITLDHVTVSFARSGGPGGQNVNKVN 118

Query: 85  TKVDMRFNVKAAHWLSDRVREKILQTEK 2
           TKVDMRFNVK A+WLSDRVRE+I+Q EK
Sbjct: 119 TKVDMRFNVKNAYWLSDRVRERIMQMEK 146


>ref|NP_001077760.1| Class I peptide chain release factor [Arabidopsis thaliana]
           gi|145326104|ref|NP_001077761.1| Class I peptide chain
           release factor [Arabidopsis thaliana]
           gi|27754314|gb|AAO22610.1| unknown protein [Arabidopsis
           thaliana] gi|28393873|gb|AAO42344.1| unknown protein
           [Arabidopsis thaliana] gi|332195891|gb|AEE34012.1| Class
           I peptide chain release factor [Arabidopsis thaliana]
           gi|332195892|gb|AEE34013.1| Class I peptide chain
           release factor [Arabidopsis thaliana]
          Length = 236

 Score =  159 bits (403), Expect = 2e-37
 Identities = 88/154 (57%), Positives = 114/154 (74%), Gaps = 7/154 (4%)
 Frame = -1

Query: 442 MAAIKTTATVLVRE-IFRPSPSPASIRTC-----CTLISSVPFPLRFISRPISYTAVRCA 281
           MAAI+T   +++RE I  P    +S ++C     C  ++ +  P+   SR +S   VRCA
Sbjct: 1   MAAIRTMTNMILREFIHHPLLLHSSSKSCQSLLPCLRLTPLISPIHSNSRLVS---VRCA 57

Query: 280 AASDSNGGGNKKASARLSQVQQQLHEAMER-SAGGDEPIPKITLDHVTVSFARSGGPGGQ 104
           A++    GG++K S+RLSQVQQ LHEA ER S+ G+EP P+ITLD+VT++FARSGGPGGQ
Sbjct: 58  ASTSGGSGGDRKVSSRLSQVQQMLHEAEERASSAGNEPTPQITLDNVTLNFARSGGPGGQ 117

Query: 103 NVNKVNTKVDMRFNVKAAHWLSDRVREKILQTEK 2
           NVNK+NTKVDMRFNVK A+WLSDR+REKIL TEK
Sbjct: 118 NVNKLNTKVDMRFNVKNAYWLSDRIREKILLTEK 151


>ref|XP_004159510.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
           [Cucumis sativus]
          Length = 232

 Score =  154 bits (389), Expect = 7e-36
 Identities = 93/152 (61%), Positives = 107/152 (70%), Gaps = 5/152 (3%)
 Frame = -1

Query: 442 MAAIKTTATVLVREIFRPSP----SPASIRTCCTLISSVPFPLRFISRPISYTAVRCAAA 275
           MA I+TT  +++REI    P    SP SI     L+      LRF  R IS+  V CAA 
Sbjct: 1   MAVIRTTTNIILREILHSQPYFSLSPPSIFP--KLLHHPNATLRFRLRDISFGRVLCAA- 57

Query: 274 SDSNGGGNKKASARLSQVQQQLHEAMERSAGGD-EPIPKITLDHVTVSFARSGGPGGQNV 98
           SDS G G K  S+R+SQ+QQ L EA ER+   D EP PKITLDHV V+FARSGGPGGQNV
Sbjct: 58  SDSPGSGGK-VSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQNV 116

Query: 97  NKVNTKVDMRFNVKAAHWLSDRVREKILQTEK 2
           NKVNTKVDMRFNVK A+WLS+R+REKILQTEK
Sbjct: 117 NKVNTKVDMRFNVKEAYWLSERIREKILQTEK 148


>ref|XP_004147947.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
           [Cucumis sativus]
          Length = 235

 Score =  152 bits (385), Expect = 2e-35
 Identities = 92/152 (60%), Positives = 107/152 (70%), Gaps = 5/152 (3%)
 Frame = -1

Query: 442 MAAIKTTATVLVREIFRPSP----SPASIRTCCTLISSVPFPLRFISRPISYTAVRCAAA 275
           +A I+TT  +++REI    P    SP SI     L+      LRF  R IS+  V CAA 
Sbjct: 4   VAVIRTTTNIILREILHSQPYFSLSPPSIFP--KLLHHPNATLRFRLRDISFGRVLCAA- 60

Query: 274 SDSNGGGNKKASARLSQVQQQLHEAMERSAGGD-EPIPKITLDHVTVSFARSGGPGGQNV 98
           SDS G G K  S+R+SQ+QQ L EA ER+   D EP PKITLDHV V+FARSGGPGGQNV
Sbjct: 61  SDSPGSGGK-VSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQNV 119

Query: 97  NKVNTKVDMRFNVKAAHWLSDRVREKILQTEK 2
           NKVNTKVDMRFNVK A+WLS+R+REKILQTEK
Sbjct: 120 NKVNTKVDMRFNVKEAYWLSERIREKILQTEK 151


>ref|XP_002886449.1| translation release factor [Arabidopsis lyrata subsp. lyrata]
           gi|297332290|gb|EFH62708.1| translation release factor
           [Arabidopsis lyrata subsp. lyrata]
          Length = 236

 Score =  151 bits (382), Expect = 5e-35
 Identities = 81/154 (52%), Positives = 110/154 (71%), Gaps = 7/154 (4%)
 Frame = -1

Query: 442 MAAIKTTATVLVREI-FRPSPSPASIRTC-----CTLISSVPFPLRFISRPISYTAVRCA 281
           MAAI+T   +++RE    P    +S ++C     C  ++ +  P+   SR   + ++RC 
Sbjct: 1   MAAIRTMTNMILREFSHHPLLLHSSSKSCQSLLPCLRLTPLIAPIHSNSR---FGSIRCV 57

Query: 280 AASDSNGGGNKKASARLSQVQQQLHEAMERS-AGGDEPIPKITLDHVTVSFARSGGPGGQ 104
           A++     G++K S+RLSQVQQ LHEA ER+ + G+EP P+ITLDHVT++FARSGGPGGQ
Sbjct: 58  ASTSGGSNGDRKVSSRLSQVQQMLHEAEERANSAGNEPTPQITLDHVTLNFARSGGPGGQ 117

Query: 103 NVNKVNTKVDMRFNVKAAHWLSDRVREKILQTEK 2
           NVNK+NTKVDMRFNVK A+WLSDR+REKI+  EK
Sbjct: 118 NVNKLNTKVDMRFNVKNAYWLSDRIREKIILKEK 151


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