BLASTX nr result

ID: Atractylodes22_contig00029352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029352
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74718.1| hypothetical protein VITISV_006955 [Vitis vinifera]   172   7e-45
emb|CAN70466.1| hypothetical protein VITISV_019286 [Vitis vinifera]   174   1e-44
emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]   172   3e-44
emb|CAN65253.1| hypothetical protein VITISV_011047 [Vitis vinifera]   171   5e-44
gb|ABM55238.1| integrase [Beta vulgaris]                              181   1e-43

>emb|CAN74718.1| hypothetical protein VITISV_006955 [Vitis vinifera]
          Length = 855

 Score =  172 bits (435), Expect(2) = 7e-45
 Identities = 88/187 (47%), Positives = 119/187 (63%), Gaps = 5/187 (2%)
 Frame = +2

Query: 164  FDQDTCQI--IKDDKILLNGFRKKNLYVCRTQVKD--QICLTSINDTTTLWHRRLGHAHL 331
            F+   C I  I++DK +  G R  N+Y       D    C +S++D + LWHRRLGHA++
Sbjct: 457  FEASHCIIKDIQNDKTIFIGHRCDNVYAINISKYDGHDRCFSSMHDQSWLWHRRLGHANM 516

Query: 332  RLIQRLKNKDLVRDLPKLKFD-NHFCDACRVGKQVHVSHKPINLVTTKRILELLHMDLFG 508
             LI +L   +LVR LPK+ F  +  C+AC++GKQ+  S K  N ++T R LELLH DLFG
Sbjct: 517  DLISQLNKDELVRGLPKINFQKDKVCEACQMGKQIKNSFKNKNFISTTRPLELLHXDLFG 576

Query: 509  PMPIQSYGGNFYTLVVVDDFSRFTWTLFLQHKNDAFQKFKTLGKRIQNQLGRTIISIRTD 688
            P    S GG  Y  V+VDDFSR+TW LFL  KN+AF +F     ++QN+ G TI  IR+D
Sbjct: 577  PSRTPSLGGKSYAFVIVDDFSRYTWVLFLSQKNEAFYEFSKFCNKVQNEKGFTITCIRSD 636

Query: 689  HGKEFDN 709
            HG+EF+N
Sbjct: 637  HGREFEN 643



 Score = 35.0 bits (79), Expect(2) = 7e-45
 Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
 Frame = +3

Query: 6   FGGESKGKVIGKGTITCNNVKFL-NVDHVCNLKFNLLSVSQL 128
           FG  SKG+++G+G I+ +    + +V  V  LK NLLS+SQL
Sbjct: 407 FGDNSKGRIVGQGNISNDTSSLIESVLLVDGLKHNLLSISQL 448


>emb|CAN70466.1| hypothetical protein VITISV_019286 [Vitis vinifera]
          Length = 689

 Score =  174 bits (442), Expect(2) = 1e-44
 Identities = 90/187 (48%), Positives = 118/187 (63%), Gaps = 5/187 (2%)
 Frame = +2

Query: 164 FDQDTCQI--IKDDKILLNGFRKKNLYVCRTQVKD--QICLTSINDTTTLWHRRLGHAHL 331
           F+   C I  I++DK +  G R  N+Y       D    C +S++D + LWHRRLGHA++
Sbjct: 71  FETSHCIIKDIQNDKTIFMGHRCDNVYAINISKYDGHDRCFSSMHDQSWLWHRRLGHANM 130

Query: 332 RLIQRLKNKDLVRDLPKLKFDNH-FCDACRVGKQVHVSHKPINLVTTKRILELLHMDLFG 508
            LI +L   +LVR LPK+ F  H  C+AC++GKQ+  S K  N  +T R LELLHMDLFG
Sbjct: 131 DLISQLNKDELVRGLPKINFQKHKVCEACQMGKQIKNSFKNKNFFSTTRPLELLHMDLFG 190

Query: 509 PMPIQSYGGNFYTLVVVDDFSRFTWTLFLQHKNDAFQKFKTLGKRIQNQLGRTIISIRTD 688
           P    S GG  Y  V+VDDFSR+TW LFL  KN+ F +F     +IQN+ G TI  IR+D
Sbjct: 191 PPRTPSLGGKSYAFVIVDDFSRYTWVLFLSQKNETFYEFSKFCNKIQNEKGFTITCIRSD 250

Query: 689 HGKEFDN 709
           HG+EF+N
Sbjct: 251 HGREFEN 257



 Score = 31.6 bits (70), Expect(2) = 1e-44
 Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +3

Query: 6   FGGESKGKVIGKGTITCNNVKFL-NVDHVCNLKFNLLSVSQL 128
           FG  SKG++IG+  I       + +V  V +LK NLLS+SQL
Sbjct: 21  FGDNSKGRIIGQDNIGNGTSSLIESVLLVDSLKHNLLSISQL 62


>emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]
          Length = 1885

 Score =  172 bits (436), Expect(2) = 3e-44
 Identities = 87/187 (46%), Positives = 121/187 (64%), Gaps = 5/187 (2%)
 Frame = +2

Query: 164  FDQDTCQI--IKDDKILLNGFRKKNLYVCRTQVKD--QICLTSINDTTTLWHRRLGHAHL 331
            F+   C I  I++DK +  G R +N+Y       D    C +S++D + LWHRRLGHA++
Sbjct: 554  FEASHCIIKDIQNDKTIFMGHRCENVYAINISKYDGHDRCFSSMHDQSWLWHRRLGHANM 613

Query: 332  RLIQRLKNKDLVRDLPKLKFD-NHFCDACRVGKQVHVSHKPINLVTTKRILELLHMDLFG 508
             LI +L   +LVR LPK+ F  +  C+AC++GKQ+  S K  N ++T R LELLHMDLFG
Sbjct: 614  DLISQLNKDELVRGLPKINFQKDKICEACQMGKQIKNSFKNKNFISTSRPLELLHMDLFG 673

Query: 509  PMPIQSYGGNFYTLVVVDDFSRFTWTLFLQHKNDAFQKFKTLGKRIQNQLGRTIISIRTD 688
            P    S GG  Y  V+VDDFSR+TW LFL  K++AF +F     ++QN+ G +I  IR+D
Sbjct: 674  PSRTPSLGGKSYAYVIVDDFSRYTWVLFLSQKSEAFYEFSKFCNKVQNEKGFSITCIRSD 733

Query: 689  HGKEFDN 709
            HG+EF+N
Sbjct: 734  HGREFEN 740



 Score = 32.7 bits (73), Expect(2) = 3e-44
 Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +3

Query: 6   FGGESKGKVIGKGTITCNNVKFL-NVDHVCNLKFNLLSVSQL 128
           FG  +KG++IG+G I       + +V  V  LK NLLS+SQL
Sbjct: 504 FGDNAKGRIIGQGNIGNGTSSLIESVLLVDGLKHNLLSISQL 545


>emb|CAN65253.1| hypothetical protein VITISV_011047 [Vitis vinifera]
          Length = 303

 Score =  171 bits (432), Expect(2) = 5e-44
 Identities = 87/185 (47%), Positives = 117/185 (63%), Gaps = 5/185 (2%)
 Frame = +2

Query: 164 FDQDTCQI--IKDDKILLNGFRKKNLYVCRTQVKDQI--CLTSINDTTTLWHRRLGHAHL 331
           F+   C I  I++DK +  G R  N+Y       D    C +S++D + LWHRRLGHA++
Sbjct: 119 FEASHCIIKDIQNDKTIFMGHRCDNVYAINISKYDDHDRCFSSMHDQSWLWHRRLGHANM 178

Query: 332 RLIQRLKNKDLVRDLPKLKFDNH-FCDACRVGKQVHVSHKPINLVTTKRILELLHMDLFG 508
            LI +L   +LVR LPK+ F  +  C+ C++GKQ+  S K  N ++T R LELLHMDLFG
Sbjct: 179 DLISQLNKDELVRGLPKINFQKYKVCEVCQIGKQIKNSFKNKNFISTTRPLELLHMDLFG 238

Query: 509 PMPIQSYGGNFYTLVVVDDFSRFTWTLFLQHKNDAFQKFKTLGKRIQNQLGRTIISIRTD 688
           P    S GG  Y  V+VDDFSR+TW LFL  KN+AF +F     ++QN+ G TI  IR+D
Sbjct: 239 PSRTPSLGGKSYAYVIVDDFSRYTWVLFLSQKNEAFYEFSKFCNKVQNEKGFTITYIRSD 298

Query: 689 HGKEF 703
           HG+EF
Sbjct: 299 HGREF 303



 Score = 33.5 bits (75), Expect(2) = 5e-44
 Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +3

Query: 6   FGGESKGKVIGKGTITCNNVKFL-NVDHVCNLKFNLLSVSQL 128
           FG  +KG++IG+G I       + +V  V  LK NLLS+SQL
Sbjct: 69  FGDNAKGRIIGQGNIDNGTFSLIESVLLVDGLKHNLLSISQL 110


>gb|ABM55238.1| integrase [Beta vulgaris]
          Length = 1516

 Score =  181 bits (460), Expect = 1e-43
 Identities = 91/190 (47%), Positives = 125/190 (65%), Gaps = 6/190 (3%)
 Frame = +2

Query: 158  INFDQDTCQII--KDDKILLNGFRKKNLYVCRTQVKDQI---CLTSINDTTTLWHRRLGH 322
            + FD++ C II  K  K++L G RK N Y+    +  QI   CL+ I D + LWH+RLGH
Sbjct: 636  VKFDKEKCLIINIKTKKVILEGTRKGNTYIVDLDLVPQINLTCLSVIEDDSLLWHKRLGH 695

Query: 323  AHLRLIQRLKNKDLVRDLPKLKFD-NHFCDACRVGKQVHVSHKPINLVTTKRILELLHMD 499
            A   L+++L++KDLV  LP +KF  +  CDAC  GKQV  S K   +V+T + LEL+H+D
Sbjct: 696  ASFSLLEKLRSKDLVLGLPSIKFHIDQVCDACARGKQVRSSFKSKTIVSTTKPLELIHID 755

Query: 500  LFGPMPIQSYGGNFYTLVVVDDFSRFTWTLFLQHKNDAFQKFKTLGKRIQNQLGRTIISI 679
            L GPM IQS  G  Y LV+VDD+SR+TW +FL  K++ + +F    KR+QN  G  I+ I
Sbjct: 756  LCGPMRIQSRSGKRYVLVIVDDYSRYTWVIFLSSKDETYDEFLVFAKRVQNLSGHKIMHI 815

Query: 680  RTDHGKEFDN 709
            R+DHGKEF+N
Sbjct: 816  RSDHGKEFEN 825


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