BLASTX nr result

ID: Atractylodes22_contig00029325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029325
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529286.1| pentatricopeptide repeat-containing protein,...   139   3e-31
ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...   134   1e-29
ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containi...   128   4e-28
ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28

>ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531275|gb|EEF33118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 672

 Score =  139 bits (349), Expect = 3e-31
 Identities = 69/100 (69%), Positives = 81/100 (81%)
 Frame = -2

Query: 300 PNXXXXXXXXXVYVRGGMFKKSRELLNELEALGYAEDEMPYCLLMDALSKAGQVDEAKLV 121
           PN         VYVRGG+F+KS++LL ELE LGYAEDEMPYCLLMD LSKAG+VDEA+  
Sbjct: 320 PNKVIWTTLLKVYVRGGLFEKSQQLLLELETLGYAEDEMPYCLLMDGLSKAGRVDEARSF 379

Query: 120 FSEMKRKNVKTDGYSYSIMISAFCRYGLLDDAKQLASEFK 1
           F EMK KNVK+DGY+YSIMISA+CR  LL++AKQLA EF+
Sbjct: 380 FDEMKEKNVKSDGYAYSIMISAYCRGRLLEEAKQLAKEFE 419


>ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic-like [Cucumis sativus]
          Length = 668

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/100 (67%), Positives = 81/100 (81%)
 Frame = -2

Query: 300 PNXXXXXXXXXVYVRGGMFKKSRELLNELEALGYAEDEMPYCLLMDALSKAGQVDEAKLV 121
           PN         VYVRGG+F+KSR+LL+ELE+LGY E+EMPYCLLMD L+KAG + EAK V
Sbjct: 311 PNKVILTTLLKVYVRGGLFEKSRKLLSELESLGYGENEMPYCLLMDGLAKAGSIREAKTV 370

Query: 120 FSEMKRKNVKTDGYSYSIMISAFCRYGLLDDAKQLASEFK 1
           F EMK KNVKTDGY++SIMISAFCR GLL++AK LA +F+
Sbjct: 371 FDEMKAKNVKTDGYAHSIMISAFCRGGLLEEAKLLAKDFE 410


>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Vitis vinifera]
           gi|298204537|emb|CBI23812.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score =  134 bits (336), Expect = 1e-29
 Identities = 67/100 (67%), Positives = 79/100 (79%)
 Frame = -2

Query: 300 PNXXXXXXXXXVYVRGGMFKKSRELLNELEALGYAEDEMPYCLLMDALSKAGQVDEAKLV 121
           PN         VYVRGG+F+KSRELL ELE LGYAEDEMPYCLLMD L+K+ ++ EAK +
Sbjct: 309 PNKVILTTLLKVYVRGGLFEKSRELLAELEDLGYAEDEMPYCLLMDGLAKSRRILEAKSI 368

Query: 120 FSEMKRKNVKTDGYSYSIMISAFCRYGLLDDAKQLASEFK 1
           F EMK+K VK+DGY YSIMISAFCR GLL +AKQLA +F+
Sbjct: 369 FEEMKKKQVKSDGYCYSIMISAFCRSGLLKEAKQLARDFE 408


>ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic-like [Glycine max]
          Length = 630

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/100 (61%), Positives = 79/100 (79%)
 Frame = -2

Query: 300 PNXXXXXXXXXVYVRGGMFKKSRELLNELEALGYAEDEMPYCLLMDALSKAGQVDEAKLV 121
           PN         VYV+GG+F+KSRELL EL++LGYAEDEMPYC+ MD L+KAGQ+ EAKL+
Sbjct: 279 PNKVILTTLLKVYVKGGLFEKSRELLAELKSLGYAEDEMPYCIFMDGLAKAGQIHEAKLI 338

Query: 120 FSEMKRKNVKTDGYSYSIMISAFCRYGLLDDAKQLASEFK 1
           F EM + +V++DGY++SIMISAFCR  L  +AKQLA +F+
Sbjct: 339 FDEMMKNHVRSDGYAHSIMISAFCRAKLFREAKQLAKDFE 378


>ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|222846925|gb|EEE84472.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  127 bits (319), Expect = 9e-28
 Identities = 62/100 (62%), Positives = 79/100 (79%)
 Frame = -2

Query: 300 PNXXXXXXXXXVYVRGGMFKKSRELLNELEALGYAEDEMPYCLLMDALSKAGQVDEAKLV 121
           PN         VYVRGG+F+KSR+LL EL+ LG+A++EMPYCLLMD L+K G +DEA+ V
Sbjct: 212 PNKVILTTLLKVYVRGGLFEKSRDLLVELDTLGFAKNEMPYCLLMDGLAKNGLLDEARSV 271

Query: 120 FSEMKRKNVKTDGYSYSIMISAFCRYGLLDDAKQLASEFK 1
           F+EMK K VK+ GYSYSIMIS+FCR GL ++AK+LA EF+
Sbjct: 272 FNEMKEKRVKSGGYSYSIMISSFCRGGLFEEAKELAEEFE 311


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