BLASTX nr result

ID: Atractylodes22_contig00029276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029276
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634293.1| PREDICTED: RING-H2 finger protein ATL48-like...    86   1e-14
ref|XP_002511421.1| conserved hypothetical protein [Ricinus comm...    85   3e-14
ref|XP_003633831.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    84   3e-14
gb|AFK38839.1| unknown [Lotus japonicus]                               81   4e-13
ref|XP_003610228.1| RING finger-like protein [Medicago truncatul...    80   6e-13

>ref|XP_003634293.1| PREDICTED: RING-H2 finger protein ATL48-like [Vitis vinifera]
          Length = 146

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 41/83 (49%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
 Frame = -2

Query: 489 LPPFQYHA-----AEESPDDCSICLEYFNEGEICRVLPVCDHVFHARCVDTWLTKVPNCP 325
           LP F+Y A     A  SP DC++CLE F +G+ CR+LP C H FH++C+D+WL K P CP
Sbjct: 57  LPCFEYKAVALEKASNSPVDCAVCLENFRKGDKCRLLPNCKHFFHSQCIDSWLLKTPICP 116

Query: 324 ICRTRVRLDAGGPSDSTISDDET 256
           ICRT     A  P  ST S  E+
Sbjct: 117 ICRT----CASTPKISTFSGQES 135


>ref|XP_002511421.1| conserved hypothetical protein [Ricinus communis]
           gi|223550536|gb|EEF52023.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 189

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
 Frame = -2

Query: 492 HLPPFQYHAAEE---SPDDCSICLEYFNEGEICRVLPVCDHVFHARCVDTWLTKVPNCPI 322
           +LP F Y AAE+   S  DC +CLE FN G+ C++LP C H FH++C+D+WL K P CPI
Sbjct: 63  NLPCFDYKAAEKEGSSSSDCVVCLENFNVGDKCKLLPNCKHSFHSQCIDSWLVKTPICPI 122

Query: 321 CRTRVRLDAGGPSDSTISDDETKFLWAIGV 232
           CRT V      P    +   E+    A+GV
Sbjct: 123 CRTIVNT----PKVGLVLRQESSISIAVGV 148


>ref|XP_003633831.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Vitis vinifera]
          Length = 188

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 7/82 (8%)
 Frame = -2

Query: 489 LPPFQYHAAEE---SPDDCSICLEYFNEGEICRVLPVCDHVFHARCVDTWLTKVPNCPIC 319
           LP F + A E+   SP DC++CL+ F  G+ CR+LP+C+H FHA+CVD+WL K P CPIC
Sbjct: 57  LPCFHFQAKEKGSSSPVDCAVCLDNFKMGDKCRLLPLCNHSFHAQCVDSWLLKTPICPIC 116

Query: 318 RTRVRLDAG----GPSDSTISD 265
           RT      G    G   S  SD
Sbjct: 117 RTSADFRKGSLVSGEESSHFSD 138


>gb|AFK38839.1| unknown [Lotus japonicus]
          Length = 188

 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 35/62 (56%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
 Frame = -2

Query: 489 LPPFQYHAAEES---PDDCSICLEYFNEGEICRVLPVCDHVFHARCVDTWLTKVPNCPIC 319
           LP + Y A + S   P DC++CLE    G+ CR+LPVC H FHA+CVDTWL K P CPIC
Sbjct: 72  LPCYDYVAKDNSTCSPVDCAVCLENLTTGDKCRLLPVCKHSFHAQCVDTWLLKTPICPIC 131

Query: 318 RT 313
           R+
Sbjct: 132 RS 133


>ref|XP_003610228.1| RING finger-like protein [Medicago truncatula]
           gi|355511283|gb|AES92425.1| RING finger-like protein
           [Medicago truncatula]
          Length = 182

 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 37/81 (45%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
 Frame = -2

Query: 495 NHLPPFQYHAAEESPDD--CSICLEYFNEGEICRVLPVCDHVFHARCVDTWLTKVPNCPI 322
           N+LP F+      S  D  C++CL+ F  G+ CR L  C HVFH RC+DTWL KV  CP 
Sbjct: 83  NNLPNFRITKGSVSEPDSRCAVCLDGFRNGQWCRNLAACGHVFHRRCIDTWLLKVATCPT 142

Query: 321 CRTRVRLDAGGPSDSTISDDE 259
           CRT VR +      S +  DE
Sbjct: 143 CRTPVRSNPQTSQGSVVEQDE 163


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