BLASTX nr result
ID: Atractylodes22_contig00029272
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00029272
(770 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002302627.1| predicted protein [Populus trichocarpa] gi|2... 163 6e-40
ref|XP_002277387.1| PREDICTED: putative RING-H2 finger protein A... 148 4e-36
ref|XP_002523355.1| RING-H2 finger protein ATL3K, putative [Rici... 147 5e-35
ref|XP_002277411.1| PREDICTED: putative RING-H2 finger protein A... 146 6e-35
ref|XP_004155166.1| PREDICTED: putative RING-H2 finger protein A... 145 1e-34
>ref|XP_002302627.1| predicted protein [Populus trichocarpa] gi|222844353|gb|EEE81900.1|
predicted protein [Populus trichocarpa]
Length = 373
Score = 163 bits (412), Expect(2) = 6e-40
Identities = 84/170 (49%), Positives = 109/170 (64%)
Frame = +3
Query: 54 FAAAAYNCPFVFCGSSAYVVHFPFRMRGQQPRICGYPGFDLRCNRQGAMLLNLPNSGEFL 233
F AA +C C V FPFR+ GQQPR CGYPGFDL CN Q + +L LP+SG+FL
Sbjct: 15 FINAAADCSISTCSIGDVPVRFPFRIEGQQPRNCGYPGFDLSCNNQSSTVLKLPHSGDFL 74
Query: 234 VRTIDYRSQVIQIYDPAGCSAARLFTLDLSGSPFSVSSSRNYTLLSCPVEVTMSRFPIVD 413
VR I+Y +Q IQ+YD C A RL L+LSGSPF +NYT LSCP ++ SRF ++
Sbjct: 75 VRDINYLTQQIQLYDSDNCLAKRLLQLNLSGSPFLGFFHQNYTFLSCPTQLVKSRFTTIN 134
Query: 414 CLSNSTYSTLATSSVSFATAIANRTACRIISSLRYPASSRWRDLWLHKYH 563
CLSNST S LATSS++ ++ ++C +IS+L+ P S W KY+
Sbjct: 135 CLSNSTISVLATSSLNLVNEMS--SSCDVISTLKIPVS------WPVKYN 176
Score = 27.7 bits (60), Expect(2) = 6e-40
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 535 GGTCGYTNTTMQEIACFDNTEKG 603
G CG+ QEI CF +++KG
Sbjct: 203 GSMCGFHGNASQEIGCFYDSKKG 225
>ref|XP_002277387.1| PREDICTED: putative RING-H2 finger protein ATL21A [Vitis vinifera]
gi|297745433|emb|CBI40513.3| unnamed protein product
[Vitis vinifera]
Length = 372
Score = 148 bits (373), Expect(2) = 4e-36
Identities = 73/151 (48%), Positives = 95/151 (62%)
Frame = +3
Query: 75 CPFVFCGSSAYVVHFPFRMRGQQPRICGYPGFDLRCNRQGAMLLNLPNSGEFLVRTIDYR 254
CP CGS+ + FPF + GQQ + CGYPGF+L C G +L LP GEF VR I+Y
Sbjct: 23 CPVSRCGSNGSTIGFPFHLVGQQHQNCGYPGFNLSCGSPGITVLRLPYWGEFFVRGINYI 82
Query: 255 SQVIQIYDPAGCSAARLFTLDLSGSPFSVSSSRNYTLLSCPVEVTMSRFPIVDCLSNSTY 434
+Q IQ+YDP C RL D++GSPF NYT L CP E+T RF +DCLSNST
Sbjct: 83 TQEIQLYDPDNCLPKRLLAFDITGSPFMAEYYLNYTFLICPSELTRFRFTAIDCLSNSTS 142
Query: 435 STLATSSVSFATAIANRTACRIISSLRYPAS 527
S LATSS+S ++ ++C+I+++L P S
Sbjct: 143 SVLATSSMSL---VSKMSSCQILTTLAVPVS 170
Score = 29.6 bits (65), Expect(2) = 4e-36
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 526 QAGGGTCGYTNTTMQEIACF 585
QA GG+CG+ N++ E+ CF
Sbjct: 200 QAQGGSCGFQNSSSLEVGCF 219
>ref|XP_002523355.1| RING-H2 finger protein ATL3K, putative [Ricinus communis]
gi|223537443|gb|EEF39071.1| RING-H2 finger protein
ATL3K, putative [Ricinus communis]
Length = 374
Score = 147 bits (371), Expect(2) = 5e-35
Identities = 76/156 (48%), Positives = 102/156 (65%), Gaps = 1/156 (0%)
Frame = +3
Query: 63 AAYNCPFVFCGSSAYVVHFPFRMRG-QQPRICGYPGFDLRCNRQGAMLLNLPNSGEFLVR 239
A+ +C C + V FPFR+ G Q + CGYPGF+L CN Q +L LP SG+FLVR
Sbjct: 18 ASEHCAVSKCSNDKVPVRFPFRLEGLQSQQQCGYPGFNLSCNNQRKTVLKLPYSGDFLVR 77
Query: 240 TIDYRSQVIQIYDPAGCSAARLFTLDLSGSPFSVSSSRNYTLLSCPVEVTMSRFPIVDCL 419
I+Y +Q IQ+YDP C RL + +LSGSPF ++ +NYT LSCP ++ SRF ++CL
Sbjct: 78 GINYLTQQIQLYDPDNCIPKRLLSFNLSGSPFLAAAHQNYTFLSCPSQLVESRFTTINCL 137
Query: 420 SNSTYSTLATSSVSFATAIANRTACRIISSLRYPAS 527
SNST S LAT+S S A ++A T+C +I +L P S
Sbjct: 138 SNSTTSVLATASKSIADSLA--TSCGVIITLSIPFS 171
Score = 26.9 bits (58), Expect(2) = 5e-35
Identities = 8/34 (23%), Positives = 19/34 (55%)
Frame = +1
Query: 535 GGTCGYTNTTMQEIACFDNTEKGHNKAMIAMIIV 636
GG CG+ +++ CF +++ G + + ++ V
Sbjct: 204 GGMCGFKTNNSEDVGCFYSSKTGQSTGALQILRV 237
>ref|XP_002277411.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Vitis
vinifera]
Length = 334
Score = 146 bits (368), Expect(2) = 6e-35
Identities = 73/155 (47%), Positives = 96/155 (61%)
Frame = +3
Query: 63 AAYNCPFVFCGSSAYVVHFPFRMRGQQPRICGYPGFDLRCNRQGAMLLNLPNSGEFLVRT 242
A +CP CGS+ + FPF + GQQ + CGYPGF+L C +L LP GEF VR
Sbjct: 19 ARESCPVSRCGSNGCTIGFPFHLVGQQHQNCGYPGFNLSCGSPDITVLRLPYWGEFFVRG 78
Query: 243 IDYRSQVIQIYDPAGCSAARLFTLDLSGSPFSVSSSRNYTLLSCPVEVTMSRFPIVDCLS 422
I+Y +Q IQ+YDP C RL D++GSPF NYT L CP E+T RF +DCLS
Sbjct: 79 INYITQEIQLYDPDNCLPKRLLAFDITGSPFMAEYYLNYTFLICPSELTRFRFTAIDCLS 138
Query: 423 NSTYSTLATSSVSFATAIANRTACRIISSLRYPAS 527
NST S LATSS+S ++ ++C+I+++L P S
Sbjct: 139 NSTSSVLATSSMSL---VSKMSSCQILTTLAVPVS 170
Score = 27.7 bits (60), Expect(2) = 6e-35
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +1
Query: 535 GGTCGYTNTTMQEIACFDNTEKGHNKAMIAMI 630
GG+CG+ N++ E+ CF +++ I ++
Sbjct: 203 GGSCGFQNSSSLEVGCFSTPGTVSDRSSIFLV 234
>ref|XP_004155166.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Cucumis
sativus]
Length = 382
Score = 145 bits (365), Expect(2) = 1e-34
Identities = 77/159 (48%), Positives = 98/159 (61%), Gaps = 4/159 (2%)
Frame = +3
Query: 66 AYNCPFVFCGSSAYVVHFPFRMRGQQPRICGYPGFDLRCNRQGAMLLNLPNSGEFLVRTI 245
A +C C + + + FPFR+ QQP CGYPGF+L CN+ G +NL S FLVR I
Sbjct: 21 AQSCSVSKCINDDFAIRFPFRIPDQQPARCGYPGFNLACNKAGVTTVNLSASEYFLVRGI 80
Query: 246 DYRSQVIQIYDPAGCSAARLF----TLDLSGSPFSVSSSRNYTLLSCPVEVTMSRFPIVD 413
DY +Q IQ+YD C RLF ++ S SPF S+N T LSCP TMS FPI+D
Sbjct: 81 DYATQQIQLYDSDDCLPGRLFQGFNKINFSNSPFMPLFSQNITFLSCPPRFTMSHFPIID 140
Query: 414 CLSNSTYSTLATSSVSFATAIANRTACRIISSLRYPASS 530
CLSNST S LATSS SF +++ T+C I+ +L P S+
Sbjct: 141 CLSNSTTSILATSSTSFVKSMS--TSCTIMKTLPVPVSN 177
Score = 28.1 bits (61), Expect(2) = 1e-34
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 535 GGTCGYTNTTMQEIACFDNTEKGHNKAMIAMIIVSV 642
G CGY + + Q I+CFD N + + I+ V
Sbjct: 208 GRLCGYKSNSGQGISCFDKYTSEENNGLRVLRIICV 243