BLASTX nr result

ID: Atractylodes22_contig00029262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029262
         (1327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   412   e-113
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   402   e-110
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...   393   e-107
ref|NP_566322.1| F-box protein [Arabidopsis thaliana] gi|7526578...   333   6e-89
ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata sub...   330   7e-88

>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
            gi|222843314|gb|EEE80861.1| f-box family protein [Populus
            trichocarpa]
          Length = 408

 Score =  412 bits (1060), Expect = e-113
 Identities = 214/416 (51%), Positives = 280/416 (67%), Gaps = 14/416 (3%)
 Frame = -3

Query: 1259 MDSDFENEPRNKKMKVGDKEVILINSQSSGFEILPRDVLLDVLTRLPISSLIQFRFVCRS 1080
            MD DFE   + +K K+ D      + Q++G E+LPR++  D+L+RLPI+SL++F+ VCR+
Sbjct: 1    MDLDFERHSKRRKTKLED------DPQTTGMELLPREIAQDILSRLPITSLVKFKCVCRA 54

Query: 1079 CYTLSHDPELPRLHHPMA-DKADPILVFHCDYPIRNQLYFVSYDGGDKI---VRKISTPF 912
               ++ DPE+  L+   +  + DP ++ HCD+PIRN LYFV +   ++    V++I  PF
Sbjct: 55   WRAMALDPEVVNLYLSCSTQETDPCVILHCDFPIRNNLYFVDFAAHEEEKEKVKRIRAPF 114

Query: 911  SRSMPEFNVVGSCNGLLCLSDSLYGEPVYVFNPFTRNHLELPKSPQFPDQEVVFGFGFHP 732
            S  MPEF VVGSCNGLLCLSDSL+ + +Y++NPFT  + ELPKS Q+PDQEVVFGFGF+P
Sbjct: 115  SSMMPEFEVVGSCNGLLCLSDSLFNDSLYIYNPFTGRYKELPKSLQYPDQEVVFGFGFNP 174

Query: 731  VTNQYKXXXXXXXXXXXRLNQNNRS--YPKSEVHVLTIGEPKWRCLGKVPYQLDRQAKEV 558
             TN+YK                +R   YP S+V +LT+G P WR LGKV Y+L R+A E 
Sbjct: 175  KTNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGCPGWRSLGKVSYRLVRRASE- 233

Query: 557  VVVNGRLHWLSRPGRVGGLPGRTIISFDLKDEQFRLVSKP----VNRSNYHLAVIGGCLA 390
             +VNGRLHW+SRP R    P R ++SFDL DEQFR V KP    +NR +YHLAV+ GCL+
Sbjct: 234  TLVNGRLHWVSRPCR--NKPARRLVSFDLTDEQFREVPKPDCGGLNRCDYHLAVLRGCLS 291

Query: 389  AAVSCGYGKLEIWVMKEYDVKESWTKHFDIHGVYLAKIPSHE----YGIWRKPMQEKMVR 222
             AV C YG+LEIWVMKEY+VKESW K ++I G Y+ K           IW+     + VR
Sbjct: 292  VAVYCNYGRLEIWVMKEYNVKESWVKEYNI-GAYMPKGLKQNLVRPLKIWKNASNGRAVR 350

Query: 221  VLCVLKNGEILMEYRGGSLVKYDPKWKEFKDVVFHGMPKLFQTIVHVGSLNWTHTP 54
             LCVLKNGEIL+EY+  +LV YDPK  +FKD+   G PK FQT+VHVGSLNW  TP
Sbjct: 351  ALCVLKNGEILLEYKNRALVSYDPKKGKFKDIDLQGTPKWFQTVVHVGSLNWIDTP 406


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
            gi|222861279|gb|EEE98821.1| f-box family protein [Populus
            trichocarpa]
          Length = 422

 Score =  402 bits (1034), Expect = e-110
 Identities = 215/417 (51%), Positives = 274/417 (65%), Gaps = 15/417 (3%)
 Frame = -3

Query: 1259 MDSDFENEPRNKKMKVGDKEVILINSQSSGFEILPRDVLLDVLTRLPISSLIQFRFVCRS 1080
            MD D E   + +K KV        + Q++G E+LPR++  D+L+RLPI+SL+QF+ VCR+
Sbjct: 1    MDLDCEKHRKRRKTKVE------YDPQTTGMELLPREIAHDILSRLPITSLVQFKCVCRA 54

Query: 1079 CYTLSHDPELPRLHHPMA--DKADPILVFHCDYPIRNQLYFVSYDGGDKI---VRKISTP 915
               L  DP+L  L+   +  D   P L+ HCD+PIRN LYFV +   ++    V++I  P
Sbjct: 55   WRALVQDPQLVDLYLSCSTQDTDHPCLILHCDFPIRNNLYFVDFAAHEEEKEKVKRIPAP 114

Query: 914  FSRSMPEFNVVGSCNGLLCLSDSLYGEPVYVFNPFTRNHLELPKSPQFPDQEVVFGFGFH 735
            FS  MPEF VVGSCNGLLCLSDSLY + +Y++NPFT  + ELPKS Q+PDQEVV GFGF+
Sbjct: 115  FSSMMPEFEVVGSCNGLLCLSDSLYNDSLYIYNPFTGCYKELPKSLQYPDQEVVSGFGFN 174

Query: 734  PVTNQYKXXXXXXXXXXXRLNQNNRS--YPKSEVHVLTIGEPKWRCLGKVPYQLDRQAKE 561
            P T +YK                +R   YP SEV +LT+G P+WR LGKV Y+L R+A  
Sbjct: 175  PKTKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCPEWRSLGKVSYRLVRRASG 234

Query: 560  VVVVNGRLHWLSRPGRVGGLPGRTIISFDLKDEQFRLVSKP----VNRSNYHLAVIGGCL 393
              +VNGRLHW+SRP R    P R ++SFDL DEQFR VSKP    +NR NYHL V+ GCL
Sbjct: 235  -ALVNGRLHWISRPCR--NKPARRLVSFDLTDEQFREVSKPDCGGLNRCNYHLVVLRGCL 291

Query: 392  AAAVSCGYGKLEIWVMKEYDVKESWTKHFDIHGVYLAK----IPSHEYGIWRKPMQEKMV 225
            +AAV C YG+LEIWVMKEY+VKESW K ++I G Y+ K        +  IW+     ++V
Sbjct: 292  SAAVYCNYGRLEIWVMKEYNVKESWVKEYNI-GAYMPKGLKQNQDRQLKIWKNSSNGRVV 350

Query: 224  RVLCVLKNGEILMEYRGGSLVKYDPKWKEFKDVVFHGMPKLFQTIVHVGSLNWTHTP 54
              LCVLKNGEIL+EY+   LV YDPK  +FKD+   G P  FQT+VHVGSLNW  TP
Sbjct: 351  GALCVLKNGEILLEYKNRVLVSYDPKNGKFKDIELQGAPNWFQTVVHVGSLNWIDTP 407


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
            gi|147785390|emb|CAN68678.1| hypothetical protein
            VITISV_041941 [Vitis vinifera]
          Length = 409

 Score =  393 bits (1009), Expect = e-107
 Identities = 214/411 (52%), Positives = 274/411 (66%), Gaps = 13/411 (3%)
 Frame = -3

Query: 1259 MDSDFENEPRNKKMKVGDKEVILINSQSSGFEILPRDVLLDVLTRLPISSLIQFRFVCRS 1080
            MD DFE   +  + ++G  E      ++S  E LPRD++LD+L+RLP++SL+QFRFVCR 
Sbjct: 1    MDLDFEKPGKRARYEMGGGE----GPRTSFMERLPRDIILDILSRLPVTSLVQFRFVCRG 56

Query: 1079 CYTLSHDPELPRLHHPMADKADPILVFHCDYPIRNQLYFV--SYDGGDK-IVRKISTPFS 909
               ++ D  L   H     + +P L+ HCDYPIRNQ+ FV  S +  DK +VRK++ PF 
Sbjct: 57   WRLMAQDSLLASKHLCRTAQYNPCLILHCDYPIRNQISFVDISAESRDKDMVRKLTIPFW 116

Query: 908  RSMPEFNVVGSCNGLLCLSDSLYGEPVYVFNPFTRNHLELPKSPQFPDQEVVFGFGFHPV 729
             SMPEF VVGSCNGLLCL+DSL+ + VYV NPFTR+  +LPKS Q+PDQEVVFGFG+HP+
Sbjct: 117  ASMPEFEVVGSCNGLLCLADSLFKDAVYVHNPFTRDFKQLPKSLQYPDQEVVFGFGYHPM 176

Query: 728  TNQYKXXXXXXXXXXXRLNQNNR--SYPKSEVHVLTIGEPKWRCLGKVPYQLDRQAKEVV 555
            T  YK                 R  +  +SEV VLT+G P WR LGKV YQLDR   E  
Sbjct: 177  TEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPTWRSLGKVSYQLDRWPSE-A 235

Query: 554  VVNGRLHWLSRPGRVGGLPGRTIISFDLKDEQFRLVSKP----VNRSNYHLAVIGGCLAA 387
            +VNGRLHW++RP R      R I+SFDL DEQFR + KP    ++R NYHL V+GGCL+A
Sbjct: 236  LVNGRLHWVTRPRR---YVTRFIVSFDLADEQFREIPKPDCGGLSRCNYHLLVLGGCLSA 292

Query: 386  AVSCGYGKLEIWVMKEYDVKESWTKHFDIHGVYLAK----IPSHEYGIWRKPMQEKMVRV 219
            AV    GKLE+WVMKEYDVKESW K F+I G +L K      +  + IWR   + + VR+
Sbjct: 293  AVHRSNGKLEVWVMKEYDVKESWIKEFNI-GAHLPKGLKQDVNRPHRIWRNAPKGRGVRL 351

Query: 218  LCVLKNGEILMEYRGGSLVKYDPKWKEFKDVVFHGMPKLFQTIVHVGSLNW 66
            LC+LKNGEIL+EY+G  LV Y+P+  +FKD+   G+P  FQT VHVGSL+W
Sbjct: 352  LCLLKNGEILLEYKGRVLVSYNPERGKFKDLTLKGLPNWFQTFVHVGSLSW 402


>ref|NP_566322.1| F-box protein [Arabidopsis thaliana]
            gi|75265789|sp|Q9SFC7.1|FB135_ARATH RecName: Full=F-box
            protein At3g07870 gi|6648199|gb|AAF21197.1|AC013483_21
            unknown protein [Arabidopsis thaliana]
            gi|15983479|gb|AAL11607.1|AF424614_1 AT3g07870/F17A17_21
            [Arabidopsis thaliana] gi|109134141|gb|ABG25068.1|
            At3g07870 [Arabidopsis thaliana]
            gi|332641092|gb|AEE74613.1| F-box protein [Arabidopsis
            thaliana]
          Length = 417

 Score =  333 bits (854), Expect = 6e-89
 Identities = 181/397 (45%), Positives = 248/397 (62%), Gaps = 23/397 (5%)
 Frame = -3

Query: 1172 GFEILPRDVLLDVLTRLPISSLIQFRFVCRSCYTLSHDPELPRLHHPMADKADPILVFHC 993
            G E LP D++ D+ +RLPISS+ +  FVCRS  ++    +  RL    +    P L+ HC
Sbjct: 24   GLESLPEDIIADIFSRLPISSIARLMFVCRSWRSVL--TQHGRLSSSSSSPTKPCLLLHC 81

Query: 992  DYPIRNQLYFVSYDGGDKIVR--KISTPFSRSMPEFNVVGSCNGLLCLSDSLYGEPVYVF 819
            D PIRN L+F+     +K ++  K +  F+ SMPEF+VVGSCNGLLCLSDSLY + +Y++
Sbjct: 82   DSPIRNGLHFLDLSEEEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYNDSLYLY 141

Query: 818  NPFTRNHLELPK-SPQFPDQEVVFGFGFHPVTNQYKXXXXXXXXXXXRLN------QNNR 660
            NPFT N LELP+ S ++ DQE+VFGFGFH +T +YK             N      +   
Sbjct: 142  NPFTTNSLELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRI 201

Query: 659  SYPKSEVHVLTIGEP------KWRCLGKVPYQLDRQAKEVVVVNGRLHWLSRPGRVGGLP 498
             Y +SEV +LT+          WR LGK PY+  +++ E +V NGRLH+++RP R   +P
Sbjct: 202  QYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALV-NGRLHFVTRPRR--HVP 258

Query: 497  GRTIISFDLKDEQFRLVSKP----VNRSNYHLAVIGGCLAAAVSCGYGKLEIWVMKEYDV 330
             R  +SFDL+DE+F+ + KP    +NR+N+ L  + GCL A V   YGKL+IWVMK Y V
Sbjct: 259  DRKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGV 318

Query: 329  KESWTKHFDIHGVYLAKIPSHEYG----IWRKPMQEKMVRVLCVLKNGEILMEYRGGSLV 162
            KESW K + I G YL K           IW+     K+VRVLC+L+NGEIL+EY+   LV
Sbjct: 319  KESWGKEYSI-GTYLPKGLKQNLDRPMWIWKNAENGKVVRVLCLLENGEILLEYKSRVLV 377

Query: 161  KYDPKWKEFKDVVFHGMPKLFQTIVHVGSLNWTHTPI 51
             YDPK  +FKD++FHG+P  F T+VH G+L+W  TP+
Sbjct: 378  AYDPKLGKFKDLLFHGLPNWFHTVVHAGTLSWFDTPL 414


>ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297328394|gb|EFH58813.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 415

 Score =  330 bits (845), Expect = 7e-88
 Identities = 186/421 (44%), Positives = 254/421 (60%), Gaps = 24/421 (5%)
 Frame = -3

Query: 1241 NEPRNKKMKVGDKEVILINSQSSGFEILPRDVLLDVLTRLPISSLIQFRFVCRSCYT-LS 1065
            +E   KK K+ D    +      G E LP D++ D+ +RLPISS+ +  FVCRS  + L+
Sbjct: 3    SEKSFKKRKITDD---VDGGGGGGLESLPGDIIADIFSRLPISSIARLMFVCRSWRSILT 59

Query: 1064 HDPELPRLHHPMADKADPILVFHCDYPIRNQLYFVSYDGGDKIVR--KISTPFSRSMPEF 891
                +     P      P L+ HCD PIRN L+F+     +K ++  K +  F  SMPEF
Sbjct: 60   QHGRVSSSSSP----TKPCLLLHCDSPIRNGLHFLDLSEEEKRIKTKKFTLRFESSMPEF 115

Query: 890  NVVGSCNGLLCLSDSLYGEPVYVFNPFTRNHLELPK-SPQFPDQEVVFGFGFHPVTNQYK 714
            +VVGSCNGLLCLSDSLY + +Y++NPFT N LELP+ S ++ DQE+VFGFGFH +T  YK
Sbjct: 116  DVVGSCNGLLCLSDSLYNDSLYLYNPFTTNSLELPECSNKYHDQELVFGFGFHEMTKDYK 175

Query: 713  XXXXXXXXXXXRLN------QNNRSYPKSEVHVLTIGEP------KWRCLGKVPYQLDRQ 570
                         N      +    Y +SEV +LT+          WR LGK PY+  ++
Sbjct: 176  VLKIVYFRGSSSSNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFMKR 235

Query: 569  AKEVVVVNGRLHWLSRPGRVGGLPGRTIISFDLKDEQFRLVSKP----VNRSNYHLAVIG 402
            + E +V NGRLH+++RP R   +P R  +SFDL+DE+F+ + KP    +NR+N+ L  + 
Sbjct: 236  SSEALV-NGRLHFVTRPRR--HVPDRKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLK 292

Query: 401  GCLAAAVSCGYGKLEIWVMKEYDVKESWTKHFDIHGVYLAKIPSHEYG----IWRKPMQE 234
            GCL A V   YGKL+IWVM+ Y VKESW K + I G YL K           IW+     
Sbjct: 293  GCLCAVVYGNYGKLDIWVMETYGVKESWGKEYSI-GTYLPKGLKQNLDRPMWIWKNAENG 351

Query: 233  KMVRVLCVLKNGEILMEYRGGSLVKYDPKWKEFKDVVFHGMPKLFQTIVHVGSLNWTHTP 54
            K+VRVLC+L+NGEIL+EY+   LV YDPK  +FKD++FHG+P  F T+VHVG+L+W  TP
Sbjct: 352  KVVRVLCLLENGEILLEYKSRVLVAYDPKLGKFKDLLFHGLPNWFHTVVHVGTLSWVDTP 411

Query: 53   I 51
            +
Sbjct: 412  L 412


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