BLASTX nr result

ID: Atractylodes22_contig00029260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029260
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB82966.1| putative protein [Arabidopsis thaliana]                79   4e-13
ref|ZP_01682798.1| hypothetical protein VCV52_B0154 [Vibrio chol...    70   2e-10
ref|XP_002438473.1| hypothetical protein SORBIDRAFT_10g020138 [S...    68   7e-10
ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatu...    67   2e-09
emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]    67   2e-09

>emb|CAB82966.1| putative protein [Arabidopsis thaliana]
          Length = 705

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/110 (41%), Positives = 70/110 (63%)
 Frame = +1

Query: 1   RNAVRYVRSSPSRYDSFLDSVAKVKSDCKRKPCLDCETRWNSTFLMLETAEKYADAFERL 180
           RNAV+YVR+S SR +SF   V +V+   +    LDC TRWNST+LML++A KY  AF+R+
Sbjct: 306 RNAVKYVRTSNSRLESFKRWV-EVEKITRGSVVLDCVTRWNSTYLMLKSALKYKVAFDRM 364

Query: 181 SLIDDNYRSYFRGANEDDEESSTRKRKMTERVLGAPEEEDWENARYIICF 330
           + +D  Y ++F+     + +S+ +KR       G P   DW+NAR+++ F
Sbjct: 365 ADMDKPYDAWFK-----EVDSNKKKRD------GPPMAIDWDNARHMVRF 403


>ref|ZP_01682798.1| hypothetical protein VCV52_B0154 [Vibrio cholerae V52]
           gi|121627761|gb|EAX60387.1| hypothetical protein
           VCV52_B0154 [Vibrio cholerae V52]
          Length = 111

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/70 (50%), Positives = 45/70 (64%)
 Frame = +1

Query: 1   RNAVRYVRSSPSRYDSFLDSVAKVKSDCKRKPCLDCETRWNSTFLMLETAEKYADAFERL 180
           R  V+YVRSS +R  +FL  V   K +  +   LD  TRWNST+LML+TAEK+  AFER 
Sbjct: 20  RQMVKYVRSSSTRTRNFLKCVEMQKIESDKMLSLDVPTRWNSTYLMLDTAEKFEKAFERF 79

Query: 181 SLIDDNYRSY 210
            L D N+ S+
Sbjct: 80  DLYDGNFNSF 89


>ref|XP_002438473.1| hypothetical protein SORBIDRAFT_10g020138 [Sorghum bicolor]
           gi|241916696|gb|EER89840.1| hypothetical protein
           SORBIDRAFT_10g020138 [Sorghum bicolor]
          Length = 330

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/67 (49%), Positives = 44/67 (65%)
 Frame = +1

Query: 1   RNAVRYVRSSPSRYDSFLDSVAKVKSDCKRKPCLDCETRWNSTFLMLETAEKYADAFERL 180
           R +++Y+RSS SR   F + +A+    CK+KP LD  TRWNST+LML+TA K+  AFE L
Sbjct: 53  RESIKYLRSSTSRKQMFREIIAREGITCKKKPSLDVITRWNSTYLMLKTALKFRKAFEVL 112

Query: 181 SLIDDNY 201
              D  Y
Sbjct: 113 ESEDQKY 119


>ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatula]
           gi|355481013|gb|AES62216.1| Elongation factor 1-alpha
           [Medicago truncatula]
          Length = 1001

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/110 (36%), Positives = 52/110 (47%)
 Frame = +1

Query: 1   RNAVRYVRSSPSRYDSFLDSVAKVKSDCKRKPCLDCETRWNSTFLMLETAEKYADAFERL 180
           R AV YVRSSP R   F   + +     K   CLD ETRWN+T+LM   A K+   FE L
Sbjct: 318 RQAVWYVRSSPLRLSKFKGLIDEQSVGGKSSVCLDVETRWNTTYLMAAAALKHEKTFEEL 377

Query: 181 SLIDDNYRSYFRGANEDDEESSTRKRKMTERVLGAPEEEDWENARYIICF 330
             +D  Y       NE           +T +  G P ++DW+  R I+ F
Sbjct: 378 CFLDQKY------VNE-----------LTTKGKGVPTQDDWKRVREILPF 410


>emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]
          Length = 1266

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/92 (38%), Positives = 51/92 (55%)
 Frame = +1

Query: 1   RNAVRYVRSSPSRYDSFLDSVAKVKSDCKRKPCLDCETRWNSTFLMLETAEKYADAFERL 180
           R +V Y  ++PSR + F D+  +++  C +K CLDC+TRWNST+LML  A  Y D F RL
Sbjct: 392 RESVAYWSATPSRVEKFEDAARQLRLPCNKKLCLDCKTRWNSTYLMLSIAITYKDVFPRL 451

Query: 181 SLIDDNYRSYFRGANEDDEESSTRKRKMTERV 276
              +  Y +         EE     R++ ER+
Sbjct: 452 KQREKLYTTV------PSEEEWNLAREICERL 477


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