BLASTX nr result

ID: Atractylodes22_contig00029231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029231
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541702.1| PREDICTED: splicing factor 3B subunit 1-like...   187   8e-46
ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like...   187   8e-46
ref|XP_002525826.1| Splicing factor 3B subunit, putative [Ricinu...   187   8e-46
ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like...   186   2e-45
gb|AFW70128.1| antigenic determinant of rec-A protein, mRNA isof...   186   2e-45

>ref|XP_003541702.1| PREDICTED: splicing factor 3B subunit 1-like [Glycine max]
          Length = 1172

 Score =  187 bits (475), Expect = 8e-46
 Identities = 96/96 (100%), Positives = 96/96 (100%)
 Frame = -2

Query: 289 RQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILV 110
           RQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILV
Sbjct: 384 RQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILV 443

Query: 109 VIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAA 2
           VIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAA
Sbjct: 444 VIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAA 479


>ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like [Vitis vinifera]
          Length = 1271

 Score =  187 bits (475), Expect = 8e-46
 Identities = 96/96 (100%), Positives = 96/96 (100%)
 Frame = -2

Query: 289 RQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILV 110
           RQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILV
Sbjct: 483 RQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILV 542

Query: 109 VIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAA 2
           VIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAA
Sbjct: 543 VIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAA 578


>ref|XP_002525826.1| Splicing factor 3B subunit, putative [Ricinus communis]
           gi|223534831|gb|EEF36520.1| Splicing factor 3B subunit,
           putative [Ricinus communis]
          Length = 1233

 Score =  187 bits (475), Expect = 8e-46
 Identities = 96/96 (100%), Positives = 96/96 (100%)
 Frame = -2

Query: 289 RQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILV 110
           RQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILV
Sbjct: 441 RQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILV 500

Query: 109 VIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAA 2
           VIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAA
Sbjct: 501 VIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAA 536


>ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like [Cucumis sativus]
           gi|449523197|ref|XP_004168610.1| PREDICTED: splicing
           factor 3B subunit 1-like [Cucumis sativus]
          Length = 1262

 Score =  186 bits (472), Expect = 2e-45
 Identities = 95/96 (98%), Positives = 96/96 (100%)
 Frame = -2

Query: 289 RQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILV 110
           RQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRP+VHKILV
Sbjct: 474 RQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILV 533

Query: 109 VIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAA 2
           VIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAA
Sbjct: 534 VIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAA 569


>gb|AFW70128.1| antigenic determinant of rec-A protein, mRNA isoform 1 [Zea mays]
           gi|413935578|gb|AFW70129.1| antigenic determinant of
           rec-A protein, mRNA isoform 2 [Zea mays]
           gi|413935579|gb|AFW70130.1| antigenic determinant of
           rec-A protein, mRNA isoform 3 [Zea mays]
           gi|413935580|gb|AFW70131.1| antigenic determinant of
           rec-A protein, mRNA isoform 4 [Zea mays]
          Length = 1280

 Score =  186 bits (472), Expect = 2e-45
 Identities = 95/96 (98%), Positives = 96/96 (100%)
 Frame = -2

Query: 289 RQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILV 110
           RQLTDKAREFGAGPLFN+ILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILV
Sbjct: 492 RQLTDKAREFGAGPLFNKILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILV 551

Query: 109 VIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAA 2
           VIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAA
Sbjct: 552 VIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAA 587


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