BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029055
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515912.1| RNA polymerase II mediator complex subunit, ...   129   2e-28
gb|EEC80233.1| hypothetical protein OsI_22170 [Oryza sativa Indi...   129   2e-28
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]   128   6e-28
ref|XP_003564093.1| PREDICTED: putative mediator of RNA polymera...   126   2e-27
ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymera...   126   2e-27

>ref|XP_002515912.1| RNA polymerase II mediator complex subunit, putative [Ricinus
           communis] gi|223544817|gb|EEF46332.1| RNA polymerase II
           mediator complex subunit, putative [Ricinus communis]
          Length = 251

 Score =  129 bits (324), Expect = 2e-28
 Identities = 58/68 (85%), Positives = 63/68 (92%), Gaps = 1/68 (1%)
 Frame = -2

Query: 203 NAAAAAPPMP-GTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDYTCNNEQLRMRSI 27
           N  A APP P GTDMTGICFRDQLWLNTYPLDRNL+FDYFALSPFYD+TCNNEQLR++SI
Sbjct: 13  NPLAPAPPQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEQLRLQSI 72

Query: 26  HPLDISHL 3
           HPLD+SHL
Sbjct: 73  HPLDLSHL 80


>gb|EEC80233.1| hypothetical protein OsI_22170 [Oryza sativa Indica Group]
          Length = 258

 Score =  129 bits (324), Expect = 2e-28
 Identities = 58/67 (86%), Positives = 60/67 (89%)
 Frame = -2

Query: 203 NAAAAAPPMPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDYTCNNEQLRMRSIH 24
           + AAA PP PGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYD TCNNE LR R IH
Sbjct: 22  DGAAALPPPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDLTCNNESLRSRQIH 81

Query: 23  PLDISHL 3
           PLD+SHL
Sbjct: 82  PLDMSHL 88


>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
          Length = 253

 Score =  128 bits (321), Expect = 6e-28
 Identities = 57/63 (90%), Positives = 60/63 (95%)
 Frame = -2

Query: 191 AAPPMPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDYTCNNEQLRMRSIHPLDI 12
           AAP  PGTDMTGICFRDQLWLN+YPLDRNLVFDYFALSPFYD+TCNNEQLR+RSIHPLD 
Sbjct: 19  AAPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDT 78

Query: 11  SHL 3
           SHL
Sbjct: 79  SHL 81


>ref|XP_003564093.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 6-like [Brachypodium distachyon]
          Length = 260

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/67 (85%), Positives = 60/67 (89%)
 Frame = -2

Query: 203 NAAAAAPPMPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDYTCNNEQLRMRSIH 24
           ++AAA PP PGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYD TCNNE LR R IH
Sbjct: 19  DSAAALPPPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDITCNNESLRSRQIH 78

Query: 23  PLDISHL 3
           PLD+S L
Sbjct: 79  PLDMSQL 85


>ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 6 [Vitis vinifera]
          Length = 258

 Score =  126 bits (317), Expect = 2e-27
 Identities = 56/63 (88%), Positives = 59/63 (93%)
 Frame = -2

Query: 191 AAPPMPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDYTCNNEQLRMRSIHPLDI 12
           A P  PGTDMTGICFRDQLWLN+YPLDRNLVFDYFALSPFYD+TCNNEQLR+RSIHPLD 
Sbjct: 24  AVPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDT 83

Query: 11  SHL 3
           SHL
Sbjct: 84  SHL 86