BLASTX nr result

ID: Atractylodes22_contig00029044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029044
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38747.2| Polyprotein, putative [Solanum demissum]                95   5e-18
emb|CAN73189.1| hypothetical protein VITISV_042346 [Vitis vinifera]    91   8e-17
emb|CAN71132.1| hypothetical protein VITISV_007235 [Vitis vinifera]    91   8e-17
gb|AAO26691.1|AF478379_1 gag-pol polyprotein [Vitis vinifera]          91   1e-16
gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]            91   1e-16

>gb|AAT38747.2| Polyprotein, putative [Solanum demissum]
          Length = 1402

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/63 (71%), Positives = 50/63 (79%)
 Frame = +1

Query: 70  KLTRELKCCVSFYPDCCVFQDLLTKRIIGKGWESDGLYILDHHTPRSIACSGSSSPFEMH 249
           KLT+ELKC VS YPD C+FQDL+TK+IIGK   SDGLYILD  TP S+ACS   SPFE H
Sbjct: 436 KLTKELKCFVSLYPDHCLFQDLMTKQIIGKRHVSDGLYILDEWTPPSVACSSIVSPFEAH 495

Query: 250 CRL 258
           CRL
Sbjct: 496 CRL 498


>emb|CAN73189.1| hypothetical protein VITISV_042346 [Vitis vinifera]
          Length = 1137

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 42/63 (66%), Positives = 47/63 (74%)
 Frame = +1

Query: 70  KLTRELKCCVSFYPDCCVFQDLLTKRIIGKGWESDGLYILDHHTPRSIACSGSSSPFEMH 249
           KLT+ L C VSF+PD CVFQDL+TKR  GKG  SDGLYILD   PR IAC  ++SP E H
Sbjct: 334 KLTKNLNCSVSFFPDHCVFQDLMTKRTFGKGHVSDGLYILDEWVPRPIACVSTASPVEAH 393

Query: 250 CRL 258
           CRL
Sbjct: 394 CRL 396


>emb|CAN71132.1| hypothetical protein VITISV_007235 [Vitis vinifera]
          Length = 1259

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 41/63 (65%), Positives = 47/63 (74%)
 Frame = +1

Query: 70  KLTRELKCCVSFYPDCCVFQDLLTKRIIGKGWESDGLYILDHHTPRSIACSGSSSPFEMH 249
           KLT+ L C VSF+PD CVFQDL+TKR  GKG  SDGLYILD   PR +AC  ++SP E H
Sbjct: 383 KLTKNLNCSVSFFPDHCVFQDLMTKRTFGKGHVSDGLYILDEWVPRPVACVSTASPIEAH 442

Query: 250 CRL 258
           CRL
Sbjct: 443 CRL 445


>gb|AAO26691.1|AF478379_1 gag-pol polyprotein [Vitis vinifera]
          Length = 450

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/63 (65%), Positives = 47/63 (74%)
 Frame = +1

Query: 70  KLTRELKCCVSFYPDCCVFQDLLTKRIIGKGWESDGLYILDHHTPRSIACSGSSSPFEMH 249
           KLT+ L C VSF+PD CVFQDL+TKR  GKG  SDGLYILD   PR +AC  ++SP E H
Sbjct: 322 KLTKNLNCSVSFFPDHCVFQDLMTKRTFGKGHVSDGLYILDEWVPRPVACVSTASPVEAH 381

Query: 250 CRL 258
           CRL
Sbjct: 382 CRL 384


>gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]
          Length = 1382

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/63 (65%), Positives = 47/63 (74%)
 Frame = +1

Query: 70  KLTRELKCCVSFYPDCCVFQDLLTKRIIGKGWESDGLYILDHHTPRSIACSGSSSPFEMH 249
           KLT+ L C VSF+PD CVFQDL+TKR  GKG  SDGLYILD   PR +AC  ++SP E H
Sbjct: 402 KLTKNLNCSVSFFPDHCVFQDLMTKRTFGKGHVSDGLYILDEWVPRPVACVSTASPVEAH 461

Query: 250 CRL 258
           CRL
Sbjct: 462 CRL 464


Top