BLASTX nr result

ID: Atractylodes22_contig00029041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029041
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...   101   7e-20
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]   101   7e-20
ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron sp...    99   3e-19
ref|XP_003590782.1| Chloroplastic group IIA intron splicing faci...    99   4e-19
ref|XP_002315729.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19

>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Vitis vinifera]
           gi|297737163|emb|CBI26364.3| unnamed protein product
           [Vitis vinifera]
          Length = 902

 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/69 (72%), Positives = 58/69 (84%)
 Frame = -1

Query: 249 RPSSLRPKNLLTKRKALARSIELQRREALLNHISTLHTRMRKLQSEIEHVSTVKNEGHEE 70
           RPS+LRPKNLLTKRKALARSIELQRREAL NHIS L   + KL+SEIE +  VK+ G EE
Sbjct: 738 RPSTLRPKNLLTKRKALARSIELQRREALYNHISALQRNVEKLRSEIEQMDIVKDHGDEE 797

Query: 69  LYDRIDAAY 43
           LYD++D+AY
Sbjct: 798 LYDKLDSAY 806


>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
          Length = 902

 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/69 (72%), Positives = 58/69 (84%)
 Frame = -1

Query: 249 RPSSLRPKNLLTKRKALARSIELQRREALLNHISTLHTRMRKLQSEIEHVSTVKNEGHEE 70
           RPS+LRPKNLLTKRKALARSIELQRREAL NHIS L   + KL+SEIE +  VK+ G EE
Sbjct: 738 RPSTLRPKNLLTKRKALARSIELQRREALYNHISALQRNVEKLRSEIEQMDIVKDHGDEE 797

Query: 69  LYDRIDAAY 43
           LYD++D+AY
Sbjct: 798 LYDKLDSAY 806


>ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Glycine max]
          Length = 835

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/69 (68%), Positives = 61/69 (88%)
 Frame = -1

Query: 249 RPSSLRPKNLLTKRKALARSIELQRREALLNHISTLHTRMRKLQSEIEHVSTVKNEGHEE 70
           RPS+LRPKNLLTKRKALARSIELQR EAL+NHISTL +++ +++SEIE +  VK++G E 
Sbjct: 723 RPSTLRPKNLLTKRKALARSIELQRHEALMNHISTLQSKVGRIRSEIEQMEKVKDKGDEA 782

Query: 69  LYDRIDAAY 43
           LYD++D+AY
Sbjct: 783 LYDKLDSAY 791


>ref|XP_003590782.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
           truncatula] gi|355479830|gb|AES61033.1| Chloroplastic
           group IIA intron splicing facilitator CRS1 [Medicago
           truncatula]
          Length = 838

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 49/69 (71%), Positives = 58/69 (84%)
 Frame = -1

Query: 249 RPSSLRPKNLLTKRKALARSIELQRREALLNHISTLHTRMRKLQSEIEHVSTVKNEGHEE 70
           RPS LRPKNLLTKRKALARSIELQR EAL +HISTL +++ KL+SEIE +  VK EG E 
Sbjct: 723 RPSMLRPKNLLTKRKALARSIELQRHEALSSHISTLQSKVEKLRSEIEQIEKVKEEGDEA 782

Query: 69  LYDRIDAAY 43
           LY+R+D+AY
Sbjct: 783 LYNRLDSAY 791


>ref|XP_002315729.1| predicted protein [Populus trichocarpa] gi|222864769|gb|EEF01900.1|
           predicted protein [Populus trichocarpa]
          Length = 894

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/69 (68%), Positives = 58/69 (84%)
 Frame = -1

Query: 249 RPSSLRPKNLLTKRKALARSIELQRREALLNHISTLHTRMRKLQSEIEHVSTVKNEGHEE 70
           RPS LRPKNLLTKRKALARSIE+QR EAL NH+S L  ++ K++SEIE +  VK++G EE
Sbjct: 727 RPSMLRPKNLLTKRKALARSIEIQRSEALQNHVSALEIKVEKIRSEIEQMGFVKDKGDEE 786

Query: 69  LYDRIDAAY 43
           LYDR+D+AY
Sbjct: 787 LYDRLDSAY 795


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