BLASTX nr result

ID: Atractylodes22_contig00028951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028951
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   115   1e-29
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...   117   2e-27
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   114   2e-27
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   101   6e-26
emb|CAN66228.1| hypothetical protein VITISV_012977 [Vitis vinifera]   102   1e-24

>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  115 bits (287), Expect(2) = 1e-29
 Identities = 53/79 (67%), Positives = 63/79 (79%)
 Frame = +2

Query: 5    RLKSIYEKELMVVVQAVHKWRAYLLGRKFTVRTDQQSLRYLMEQRIVEPEYQKWISKLLG 184
            R KSIYE+ELM +V AV KWR YLLGR F VRTDQ SL++L+EQRIV   YQKW++KL G
Sbjct: 1568 RQKSIYERELMAIVLAVQKWRHYLLGRHFIVRTDQSSLKFLLEQRIVNESYQKWVAKLFG 1627

Query: 185  YEFEINYRPSSSNKAADAV 241
            Y+FEI +RP   NKAADA+
Sbjct: 1628 YDFEIQFRPGXENKAADAL 1646



 Score = 39.7 bits (91), Expect(2) = 1e-29
 Identities = 18/42 (42%), Positives = 28/42 (66%)
 Frame = +3

Query: 327  DPFLSKVRKEN*NQPNSHPGFSLQQQLLMYKGRLVLSHSSNL 452
            DP L K+++     P+++P +SL   +L+YKGRLVL  +S L
Sbjct: 1676 DPHLXKIKQRLLXDPDAYPRYSLDHGILLYKGRLVLPKASPL 1717


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score =  117 bits (294), Expect(2) = 2e-27
 Identities = 49/79 (62%), Positives = 67/79 (84%)
 Frame = +2

Query: 5    RLKSIYEKELMVVVQAVHKWRAYLLGRKFTVRTDQQSLRYLMEQRIVEPEYQKWISKLLG 184
            R+K +YE+ELM VV AV +WR YLLG+ F VRTDQ+SL++L+EQR+++P+YQKW++KLLG
Sbjct: 1867 RVKPVYERELMAVVMAVQRWRPYLLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLG 1926

Query: 185  YEFEINYRPSSSNKAADAV 241
            Y FE+ Y+P   NKAADA+
Sbjct: 1927 YSFEVQYKPGLENKAADAL 1945



 Score = 29.3 bits (64), Expect(2) = 2e-27
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 303  VIRQEGL*DPFLSKVRKE-N*NQPNSHPGFSLQQQLLMYKGRLVLSHSSNL 452
            V+++E   D  L KV  E    + N+   FS++  +L YK RLVLS SS L
Sbjct: 1967 VVKKEVEEDIRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSAL 2017


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  114 bits (285), Expect(2) = 2e-27
 Identities = 51/80 (63%), Positives = 66/80 (82%)
 Frame = +2

Query: 2    ARLKSIYEKELMVVVQAVHKWRAYLLGRKFTVRTDQQSLRYLMEQRIVEPEYQKWISKLL 181
            A+LKS+YEKELM +  AV KW+ YLLGR F VRTDQQSLRY+ +QR +  E+QKW+SKL+
Sbjct: 1019 AQLKSVYEKELMAICFAVQKWKYYLLGRHFVVRTDQQSLRYITQQREIGAEFQKWVSKLM 1078

Query: 182  GYEFEINYRPSSSNKAADAV 241
            GY+FEI+Y+P  SN+ ADA+
Sbjct: 1079 GYDFEIHYKPGLSNRVADAL 1098



 Score = 32.7 bits (73), Expect(2) = 2e-27
 Identities = 19/53 (35%), Positives = 31/53 (58%)
 Frame = +3

Query: 294  QWEVIRQEGL*DPFLSKVRKEN*NQPNSHPGFSLQQQLLMYKGRLVLSHSSNL 452
            +W  +R+E   D FL++VRKE   +  +   F+L    L++KGR V+  SS +
Sbjct: 1118 EWAELRREITGDSFLTQVRKEL-QEGRTPSHFTLVDGNLLFKGRYVIPSSSTI 1169


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score =  101 bits (252), Expect(2) = 6e-26
 Identities = 47/77 (61%), Positives = 58/77 (75%)
 Frame = +2

Query: 11  KSIYEKELMVVVQAVHKWRAYLLGRKFTVRTDQQSLRYLMEQRIVEPEYQKWISKLLGYE 190
           KS YEKELM VV A+  WR YLLGR+F V TDQ+SL+ L++QR+V  E Q W +KLLGY+
Sbjct: 713 KSAYEKELMAVVLAIQHWRPYLLGRRFVVSTDQKSLKQLLQQRVVTAEQQNWAAKLLGYD 772

Query: 191 FEINYRPSSSNKAADAV 241
           FEI Y+P   NK ADA+
Sbjct: 773 FEIIYKPGKLNKGADAL 789



 Score = 40.8 bits (94), Expect(2) = 6e-26
 Identities = 20/54 (37%), Positives = 34/54 (62%)
 Frame = +3

Query: 285 QWRQWEVIRQEGL*DPFLSKVRKEN*NQPNSHPGFSLQQQLLMYKGRLVLSHSS 446
           QW+  +++R+E   D  L K+  +     +S PG+ L+Q +L+Y+GRLV+S  S
Sbjct: 806 QWKDEKLLREELSRDSQLQKIIGDLQRDASSRPGYMLKQGVLLYEGRLVVSSKS 859


>emb|CAN66228.1| hypothetical protein VITISV_012977 [Vitis vinifera]
          Length = 1258

 Score =  102 bits (253), Expect(2) = 1e-24
 Identities = 46/79 (58%), Positives = 60/79 (75%)
 Frame = +2

Query: 5    RLKSIYEKELMVVVQAVHKWRAYLLGRKFTVRTDQQSLRYLMEQRIVEPEYQKWISKLLG 184
            R K IY++ELM +  A+ KWR YLLGR F V+TDQ SL++L+EQR+V   YQKW++KL G
Sbjct: 814  RQKFIYKRELMAIGLAIQKWRHYLLGRHFIVQTDQSSLKFLLEQRVVNELYQKWVAKLFG 873

Query: 185  YEFEINYRPSSSNKAADAV 241
            Y+FEI + P   NKAADA+
Sbjct: 874  YDFEIQFPPELKNKAADAL 892



 Score = 35.8 bits (81), Expect(2) = 1e-24
 Identities = 18/42 (42%), Positives = 27/42 (64%)
 Frame = +3

Query: 327  DPFLSKVRKEN*NQPNSHPGFSLQQQLLMYKGRLVLSHSSNL 452
            DP L+K+ +      N++P +SL   +L+YKGRLVL  +S L
Sbjct: 922  DPHLAKILQRLLVDLNAYPRYSLDHGVLLYKGRLVLPKASPL 963


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