BLASTX nr result
ID: Atractylodes22_contig00028940
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00028940 (422 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK48359.1| unknown [Lotus japonicus] 69 5e-10 ref|XP_004144627.1| PREDICTED: RING-H2 finger protein ATL18-like... 60 1e-07 gb|AAC68664.1| RING-H2 finger protein RHA1a [Arabidopsis thalian... 58 9e-07 ref|NP_192876.1| RING-H2 zinc finger protein RHA1a [Arabidopsis ... 57 2e-06 ref|XP_002872581.1| ring-H2 finger protein RHA1a [Arabidopsis ly... 57 2e-06 >gb|AFK48359.1| unknown [Lotus japonicus] Length = 137 Score = 68.6 bits (166), Expect = 5e-10 Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 9/114 (7%) Frame = +1 Query: 10 VINLIFYFSLLFPIFRIKNQLLNLLKDSLFHKE--EDDVFLMDLPIILFEDLQDRRHREV 183 V+ ++FY +L P+ +K L +L LF K+ E + LP+ FEDL+ + E Sbjct: 13 VVTIVFYTCILIPLKELKGALASLF--GLFSKDVVEFLAVISSLPVARFEDLRRQCCCEG 70 Query: 184 -------EEMCFICSANFDNDDVVCQLSRCGHVFHSECVGKLIQQKQSDCPFCR 324 E++C IC F+ +D V +L R GHVFH C+ + + + Q CP CR Sbjct: 71 GDDDELREKICSICLVEFEGEDAVSKLERRGHVFHLNCIEQWLDRCQFSCPLCR 124 >ref|XP_004144627.1| PREDICTED: RING-H2 finger protein ATL18-like [Cucumis sativus] gi|449500186|ref|XP_004161028.1| PREDICTED: RING-H2 finger protein ATL18-like [Cucumis sativus] Length = 125 Score = 60.5 bits (145), Expect = 1e-07 Identities = 28/64 (43%), Positives = 37/64 (57%) Frame = +1 Query: 133 LPIILFEDLQDRRHREVEEMCFICSANFDNDDVVCQLSRCGHVFHSECVGKLIQQKQSDC 312 L + FE+LQ R EE+C +C F + +V QL RC HVFH EC+ +Q+ Q C Sbjct: 56 LLVCRFEELQ-RAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTC 114 Query: 313 PFCR 324 P CR Sbjct: 115 PLCR 118 >gb|AAC68664.1| RING-H2 finger protein RHA1a [Arabidopsis thaliana] gi|21554250|gb|AAM63325.1| RING-H2 finger protein RHA1a-like protein [Arabidopsis thaliana] Length = 159 Score = 57.8 bits (138), Expect = 9e-07 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Frame = +1 Query: 133 LPIILFEDLQDRRHREVEEMCFICSANFDNDDVVCQLSRCGHVFHSECVGK-LIQQKQSD 309 +P++ F DL + E+ C +C ++F++DD V QL +CGHVFH C+ + ++ + Sbjct: 70 IPVVRFSDLPT----DPEDCCTVCLSDFESDDKVRQLPKCGHVFHHHCLDRWIVDYNKMK 125 Query: 310 CPFCR 324 CP CR Sbjct: 126 CPVCR 130 >ref|NP_192876.1| RING-H2 zinc finger protein RHA1a [Arabidopsis thaliana] gi|51316538|sp|Q9SUS4.1|RHA1A_ARATH RecName: Full=RING-H2 zinc finger protein RHA1a gi|5596483|emb|CAB51421.1| RING-H2 finger protein RHA1a-like protein [Arabidopsis thaliana] gi|7267836|emb|CAB81238.1| RING-H2 finger protein RHA1a-like protein [Arabidopsis thaliana] gi|332657602|gb|AEE83002.1| RING-H2 zinc finger protein RHA1a [Arabidopsis thaliana] Length = 159 Score = 57.0 bits (136), Expect = 2e-06 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Frame = +1 Query: 133 LPIILFEDLQDRRHREVEEMCFICSANFDNDDVVCQLSRCGHVFHSECVGK-LIQQKQSD 309 +P++ F DL + E+ C +C ++F++DD V QL +CGHVFH C+ + ++ + Sbjct: 70 IPVVRFSDLPT----DPEDCCTVCLSDFESDDKVRQLPKCGHVFHHYCLDRWIVDYNKMK 125 Query: 310 CPFCR 324 CP CR Sbjct: 126 CPVCR 130 >ref|XP_002872581.1| ring-H2 finger protein RHA1a [Arabidopsis lyrata subsp. lyrata] gi|297318418|gb|EFH48840.1| ring-H2 finger protein RHA1a [Arabidopsis lyrata subsp. lyrata] Length = 159 Score = 57.0 bits (136), Expect = 2e-06 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Frame = +1 Query: 133 LPIILFEDLQDRRHREVEEMCFICSANFDNDDVVCQLSRCGHVFHSECVGK-LIQQKQSD 309 +P++ F DL + E+ C IC ++FD++D + QL +CGHVFH C+ + ++ + Sbjct: 70 IPVVRFSDLLT----DPEDCCTICLSDFDSNDKIRQLPKCGHVFHQRCLDRWIVDFNKMK 125 Query: 310 CPFCR 324 CP CR Sbjct: 126 CPICR 130