BLASTX nr result

ID: Atractylodes22_contig00028940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028940
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48359.1| unknown [Lotus japonicus]                               69   5e-10
ref|XP_004144627.1| PREDICTED: RING-H2 finger protein ATL18-like...    60   1e-07
gb|AAC68664.1| RING-H2 finger protein RHA1a [Arabidopsis thalian...    58   9e-07
ref|NP_192876.1| RING-H2 zinc finger protein RHA1a [Arabidopsis ...    57   2e-06
ref|XP_002872581.1| ring-H2 finger protein RHA1a [Arabidopsis ly...    57   2e-06

>gb|AFK48359.1| unknown [Lotus japonicus]
          Length = 137

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 9/114 (7%)
 Frame = +1

Query: 10  VINLIFYFSLLFPIFRIKNQLLNLLKDSLFHKE--EDDVFLMDLPIILFEDLQDRRHREV 183
           V+ ++FY  +L P+  +K  L +L    LF K+  E    +  LP+  FEDL+ +   E 
Sbjct: 13  VVTIVFYTCILIPLKELKGALASLF--GLFSKDVVEFLAVISSLPVARFEDLRRQCCCEG 70

Query: 184 -------EEMCFICSANFDNDDVVCQLSRCGHVFHSECVGKLIQQKQSDCPFCR 324
                  E++C IC   F+ +D V +L R GHVFH  C+ + + + Q  CP CR
Sbjct: 71  GDDDELREKICSICLVEFEGEDAVSKLERRGHVFHLNCIEQWLDRCQFSCPLCR 124


>ref|XP_004144627.1| PREDICTED: RING-H2 finger protein ATL18-like [Cucumis sativus]
           gi|449500186|ref|XP_004161028.1| PREDICTED: RING-H2
           finger protein ATL18-like [Cucumis sativus]
          Length = 125

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/64 (43%), Positives = 37/64 (57%)
 Frame = +1

Query: 133 LPIILFEDLQDRRHREVEEMCFICSANFDNDDVVCQLSRCGHVFHSECVGKLIQQKQSDC 312
           L +  FE+LQ R     EE+C +C   F  + +V QL RC HVFH EC+   +Q+ Q  C
Sbjct: 56  LLVCRFEELQ-RAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTC 114

Query: 313 PFCR 324
           P CR
Sbjct: 115 PLCR 118


>gb|AAC68664.1| RING-H2 finger protein RHA1a [Arabidopsis thaliana]
           gi|21554250|gb|AAM63325.1| RING-H2 finger protein
           RHA1a-like protein [Arabidopsis thaliana]
          Length = 159

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +1

Query: 133 LPIILFEDLQDRRHREVEEMCFICSANFDNDDVVCQLSRCGHVFHSECVGK-LIQQKQSD 309
           +P++ F DL      + E+ C +C ++F++DD V QL +CGHVFH  C+ + ++   +  
Sbjct: 70  IPVVRFSDLPT----DPEDCCTVCLSDFESDDKVRQLPKCGHVFHHHCLDRWIVDYNKMK 125

Query: 310 CPFCR 324
           CP CR
Sbjct: 126 CPVCR 130


>ref|NP_192876.1| RING-H2 zinc finger protein RHA1a [Arabidopsis thaliana]
           gi|51316538|sp|Q9SUS4.1|RHA1A_ARATH RecName:
           Full=RING-H2 zinc finger protein RHA1a
           gi|5596483|emb|CAB51421.1| RING-H2 finger protein
           RHA1a-like protein [Arabidopsis thaliana]
           gi|7267836|emb|CAB81238.1| RING-H2 finger protein
           RHA1a-like protein [Arabidopsis thaliana]
           gi|332657602|gb|AEE83002.1| RING-H2 zinc finger protein
           RHA1a [Arabidopsis thaliana]
          Length = 159

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +1

Query: 133 LPIILFEDLQDRRHREVEEMCFICSANFDNDDVVCQLSRCGHVFHSECVGK-LIQQKQSD 309
           +P++ F DL      + E+ C +C ++F++DD V QL +CGHVFH  C+ + ++   +  
Sbjct: 70  IPVVRFSDLPT----DPEDCCTVCLSDFESDDKVRQLPKCGHVFHHYCLDRWIVDYNKMK 125

Query: 310 CPFCR 324
           CP CR
Sbjct: 126 CPVCR 130


>ref|XP_002872581.1| ring-H2 finger protein RHA1a [Arabidopsis lyrata subsp. lyrata]
           gi|297318418|gb|EFH48840.1| ring-H2 finger protein RHA1a
           [Arabidopsis lyrata subsp. lyrata]
          Length = 159

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +1

Query: 133 LPIILFEDLQDRRHREVEEMCFICSANFDNDDVVCQLSRCGHVFHSECVGK-LIQQKQSD 309
           +P++ F DL      + E+ C IC ++FD++D + QL +CGHVFH  C+ + ++   +  
Sbjct: 70  IPVVRFSDLLT----DPEDCCTICLSDFDSNDKIRQLPKCGHVFHQRCLDRWIVDFNKMK 125

Query: 310 CPFCR 324
           CP CR
Sbjct: 126 CPICR 130


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