BLASTX nr result

ID: Atractylodes22_contig00028935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028935
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max]   233   2e-59
gb|ACU23058.1| unknown [Glycine max]                                  233   2e-59
ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycin...   233   2e-59
ref|XP_003597692.1| Nucleoporin NUP53, partial [Medicago truncat...   231   8e-59
ref|XP_003597693.1| Nucleoporin NUP53 [Medicago truncatula] gi|3...   231   8e-59

>ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max]
          Length = 331

 Score =  233 bits (595), Expect = 2e-59
 Identities = 134/234 (57%), Positives = 158/234 (67%)
 Frame = -2

Query: 703 STIHRTSKSSGRQSLFFNDLASPGTARRSGSGKFTTPGQAAAVSALWRENFATSDLPPPP 524
           +T+ RT +SS R SLFF DLASP +ARR   GKF++PGQAAAVS+LWRENF +SDLPPPP
Sbjct: 3   TTVQRTPRSS-RHSLFFQDLASPVSARR---GKFSSPGQAAAVSSLWRENFGSSDLPPPP 58

Query: 523 VFTLQDRSDYSPESGVPDYSVVSPEPCSNPRTPARTPSKLFSTSIDKXXXXXXXXXXXSY 344
           VFTL+DRSD+SPESG+ DY + SPE  S+ RTP +T +K FST +              Y
Sbjct: 59  VFTLEDRSDFSPESGILDYQI-SPEAKSDTRTPIQTSNKEFSTPLKSKSEASTS-----Y 112

Query: 343 ALKGNQQLQSKQSMVGNLXXXXXXXXXXXXXXXXXXXXXXPVEGVVHHQPWGLITLPPPR 164
           AL+G QQ Q     +                         PVEGVV  QP  LITLPPP 
Sbjct: 113 ALRGVQQNQQGSPGLS----WWSPTTAKSVGEQDEKGRSSPVEGVV--QPGALITLPPPL 166

Query: 163 EVARPKIQRDSLFVGNFDEEEWVTVYGFSPSDTNLVLREFERCGVILKHVPGPR 2
           EVARP++QR+SL  GN +EEEWVTVYGFSP DTN+VLREFE+CG ILKHVPGPR
Sbjct: 167 EVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPR 220


>gb|ACU23058.1| unknown [Glycine max]
          Length = 307

 Score =  233 bits (595), Expect = 2e-59
 Identities = 134/234 (57%), Positives = 158/234 (67%)
 Frame = -2

Query: 703 STIHRTSKSSGRQSLFFNDLASPGTARRSGSGKFTTPGQAAAVSALWRENFATSDLPPPP 524
           +T+ RT +SS R SLFF DLASP +ARR   GKF++PGQAAAVS+LWRENF +SDLPPPP
Sbjct: 3   TTVQRTPRSS-RHSLFFQDLASPVSARR---GKFSSPGQAAAVSSLWRENFGSSDLPPPP 58

Query: 523 VFTLQDRSDYSPESGVPDYSVVSPEPCSNPRTPARTPSKLFSTSIDKXXXXXXXXXXXSY 344
           VFTL+DRSD+SPESG+ DY + SPE  S+ RTP +T +K FST +              Y
Sbjct: 59  VFTLEDRSDFSPESGILDYQI-SPEAKSDTRTPIQTSNKEFSTPLKSKSEASTS-----Y 112

Query: 343 ALKGNQQLQSKQSMVGNLXXXXXXXXXXXXXXXXXXXXXXPVEGVVHHQPWGLITLPPPR 164
           AL+G QQ Q     +                         PVEGVV  QP  LITLPPP 
Sbjct: 113 ALRGVQQNQQGSPGLS----WWSPTTAKSVGEQDEKGRSSPVEGVV--QPGALITLPPPL 166

Query: 163 EVARPKIQRDSLFVGNFDEEEWVTVYGFSPSDTNLVLREFERCGVILKHVPGPR 2
           EVARP++QR+SL  GN +EEEWVTVYGFSP DTN+VLREFE+CG ILKHVPGPR
Sbjct: 167 EVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPR 220


>ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycine max]
           gi|255639315|gb|ACU19955.1| unknown [Glycine max]
          Length = 331

 Score =  233 bits (595), Expect = 2e-59
 Identities = 134/234 (57%), Positives = 158/234 (67%)
 Frame = -2

Query: 703 STIHRTSKSSGRQSLFFNDLASPGTARRSGSGKFTTPGQAAAVSALWRENFATSDLPPPP 524
           +T+ RT +SS RQSLFF DLASP +ARR   GKF++P QAAAVS+LWRENF +SDLPPPP
Sbjct: 3   TTVQRTPRSS-RQSLFFQDLASPVSARR---GKFSSPSQAAAVSSLWRENFGSSDLPPPP 58

Query: 523 VFTLQDRSDYSPESGVPDYSVVSPEPCSNPRTPARTPSKLFSTSIDKXXXXXXXXXXXSY 344
           VFTL+DRSD+SPESG+ DY + SPE  S+ RTP +T +K FST +              Y
Sbjct: 59  VFTLEDRSDFSPESGILDYQI-SPETKSDTRTPIQTSNKEFSTPVKSKSEASTS-----Y 112

Query: 343 ALKGNQQLQSKQSMVGNLXXXXXXXXXXXXXXXXXXXXXXPVEGVVHHQPWGLITLPPPR 164
           AL+G QQ Q     +                         PVEGVV  QP  LITLPPP 
Sbjct: 113 ALRGVQQNQQGSPGLS----WWSPTTAKSGGEQDERGRSSPVEGVV--QPGALITLPPPL 166

Query: 163 EVARPKIQRDSLFVGNFDEEEWVTVYGFSPSDTNLVLREFERCGVILKHVPGPR 2
           EVARP++QR+SL  GN +EEEWVTVYGFSP DTN+VLREFE+CG ILKHVPGPR
Sbjct: 167 EVARPEVQRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPR 220


>ref|XP_003597692.1| Nucleoporin NUP53, partial [Medicago truncatula]
           gi|355486740|gb|AES67943.1| Nucleoporin NUP53, partial
           [Medicago truncatula]
          Length = 263

 Score =  231 bits (590), Expect = 8e-59
 Identities = 133/234 (56%), Positives = 156/234 (66%)
 Frame = -2

Query: 703 STIHRTSKSSGRQSLFFNDLASPGTARRSGSGKFTTPGQAAAVSALWRENFATSDLPPPP 524
           ST  + +  SGRQSLFF DLASP  ARR   GKF++PGQ+ A S+LWRENF  SDLPPPP
Sbjct: 2   STTAQRTPRSGRQSLFFQDLASPVNARR---GKFSSPGQSGASSSLWRENFGNSDLPPPP 58

Query: 523 VFTLQDRSDYSPESGVPDYSVVSPEPCSNPRTPARTPSKLFSTSIDKXXXXXXXXXXXSY 344
            FTL+DRSD+SPESG+ DY + SPE  S+ +TP +TP++ FST               SY
Sbjct: 59  FFTLEDRSDFSPESGILDYQM-SPETKSDHKTPIQTPNREFSTPAK-----GKSEASTSY 112

Query: 343 ALKGNQQLQSKQSMVGNLXXXXXXXXXXXXXXXXXXXXXXPVEGVVHHQPWGLITLPPPR 164
           AL+G QQ Q      G+L                      PVEGVV  QP  LITLPPP 
Sbjct: 113 ALRGVQQNQQ-----GSLSLNWWSSPAKSGGEQEEKGRGSPVEGVV--QPGALITLPPPP 165

Query: 163 EVARPKIQRDSLFVGNFDEEEWVTVYGFSPSDTNLVLREFERCGVILKHVPGPR 2
           EVARP++QR+SL  GN +EEEWVTVYGFSP+DTNLVLREFE+CG ILKHVPGPR
Sbjct: 166 EVARPEVQRNSLPAGNLNEEEWVTVYGFSPNDTNLVLREFEKCGEILKHVPGPR 219


>ref|XP_003597693.1| Nucleoporin NUP53 [Medicago truncatula] gi|355486741|gb|AES67944.1|
           Nucleoporin NUP53 [Medicago truncatula]
          Length = 330

 Score =  231 bits (590), Expect = 8e-59
 Identities = 133/234 (56%), Positives = 156/234 (66%)
 Frame = -2

Query: 703 STIHRTSKSSGRQSLFFNDLASPGTARRSGSGKFTTPGQAAAVSALWRENFATSDLPPPP 524
           ST  + +  SGRQSLFF DLASP  ARR   GKF++PGQ+ A S+LWRENF  SDLPPPP
Sbjct: 2   STTAQRTPRSGRQSLFFQDLASPVNARR---GKFSSPGQSGASSSLWRENFGNSDLPPPP 58

Query: 523 VFTLQDRSDYSPESGVPDYSVVSPEPCSNPRTPARTPSKLFSTSIDKXXXXXXXXXXXSY 344
            FTL+DRSD+SPESG+ DY + SPE  S+ +TP +TP++ FST               SY
Sbjct: 59  FFTLEDRSDFSPESGILDYQM-SPETKSDHKTPIQTPNREFSTPAK-----GKSEASTSY 112

Query: 343 ALKGNQQLQSKQSMVGNLXXXXXXXXXXXXXXXXXXXXXXPVEGVVHHQPWGLITLPPPR 164
           AL+G QQ Q      G+L                      PVEGVV  QP  LITLPPP 
Sbjct: 113 ALRGVQQNQQ-----GSLSLNWWSSPAKSGGEQEEKGRGSPVEGVV--QPGALITLPPPP 165

Query: 163 EVARPKIQRDSLFVGNFDEEEWVTVYGFSPSDTNLVLREFERCGVILKHVPGPR 2
           EVARP++QR+SL  GN +EEEWVTVYGFSP+DTNLVLREFE+CG ILKHVPGPR
Sbjct: 166 EVARPEVQRNSLPAGNLNEEEWVTVYGFSPNDTNLVLREFEKCGEILKHVPGPR 219


Top