BLASTX nr result

ID: Atractylodes22_contig00028929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028929
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531123.1| chromodomain helicase DNA binding protein, p...    97   1e-18
emb|CBI24213.3| unnamed protein product [Vitis vinifera]               91   7e-17
ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding...    91   7e-17
ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...    76   3e-12
ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...    76   3e-12

>ref|XP_002531123.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223529287|gb|EEF31257.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 1718

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/84 (60%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
 Frame = -3

Query: 409  QSSALLSKGLDAAKFEAWKRRRRAEADTNSQFQPLQQRPSSNGMLIPDPSS-GILGPAPS 233
            Q S  + KG D  KFEAWKRR+RAEAD  SQ QP  QRP SNG  + DP+S GILG APS
Sbjct: 1635 QMSDPIQKGHDNGKFEAWKRRKRAEADMQSQVQPPLQRPMSNGARVTDPNSLGILGAAPS 1694

Query: 232  GEERPQRTRQTGFGPRQGFPSGVK 161
               R  R  QTGF P+Q FPSG+K
Sbjct: 1695 DNRRFFRMHQTGFPPKQNFPSGIK 1718


>emb|CBI24213.3| unnamed protein product [Vitis vinifera]
          Length = 1539

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 50/90 (55%), Positives = 63/90 (70%), Gaps = 7/90 (7%)
 Frame = -3

Query: 409  QSSALLSKGLDAAKFEAWKRRRRAE-ADTNSQFQPLQQRPSSNGMLIPDPSS-GILGPAP 236
            Q++  +SK  DA KFEAWKRRRRA+  +T+S  QPL QRP SNG  +PDP+S GILG  P
Sbjct: 1450 QTAEPVSKSHDAGKFEAWKRRRRADNINTHSLTQPLPQRPMSNGSRLPDPNSLGILGSGP 1509

Query: 235  S-----GEERPQRTRQTGFGPRQGFPSGVK 161
            +     G E+P R RQ+G+ PRQGF S +K
Sbjct: 1510 TDNRRFGNEKPSRMRQSGYPPRQGFSSVIK 1539


>ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
            vinifera]
          Length = 1764

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 50/90 (55%), Positives = 63/90 (70%), Gaps = 7/90 (7%)
 Frame = -3

Query: 409  QSSALLSKGLDAAKFEAWKRRRRAE-ADTNSQFQPLQQRPSSNGMLIPDPSS-GILGPAP 236
            Q++  +SK  DA KFEAWKRRRRA+  +T+S  QPL QRP SNG  +PDP+S GILG  P
Sbjct: 1675 QTAEPVSKSHDAGKFEAWKRRRRADNINTHSLTQPLPQRPMSNGSRLPDPNSLGILGSGP 1734

Query: 235  S-----GEERPQRTRQTGFGPRQGFPSGVK 161
            +     G E+P R RQ+G+ PRQGF S +K
Sbjct: 1735 TDNRRFGNEKPSRMRQSGYPPRQGFSSVIK 1764


>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1764

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/78 (53%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
 Frame = -3

Query: 379  DAAKFEAWKRRRRAEADTNSQFQPLQQRPSSNGMLIPDPSS-GILGPAPS----GEERPQ 215
            +  K EAWKRRRR E+D + Q QP  QR  SNG+ I DP+S GILG  PS      E+P 
Sbjct: 1687 NTGKSEAWKRRRRTESDNHFQGQPPPQRTLSNGIRITDPNSLGILGAGPSDKRFASEKPY 1746

Query: 214  RTRQTGFGPRQGFPSGVK 161
            RT+  GF  RQGF SG+K
Sbjct: 1747 RTQPGGFPSRQGFSSGIK 1764


>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1767

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/78 (53%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
 Frame = -3

Query: 379  DAAKFEAWKRRRRAEADTNSQFQPLQQRPSSNGMLIPDPSS-GILGPAPS----GEERPQ 215
            +  K EAWKRRRR E+D + Q QP  QR  SNG+ I DP+S GILG  PS      E+P 
Sbjct: 1690 NTGKSEAWKRRRRTESDNHFQGQPPPQRTVSNGVRIADPNSLGILGAGPSDKRFASEKPY 1749

Query: 214  RTRQTGFGPRQGFPSGVK 161
            RT+  GF  RQGF SG+K
Sbjct: 1750 RTQPGGFPSRQGFSSGIK 1767


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