BLASTX nr result

ID: Atractylodes22_contig00028926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028926
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia...    57   2e-06
ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    57   2e-06
ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    56   3e-06
emb|CAB10188.1| hypothetical protein [Arabidopsis thaliana] gi|7...    56   3e-06

>ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 443

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/79 (43%), Positives = 49/79 (62%)
 Frame = +2

Query: 2   IDLDDSLHLNPSRKWSNSGLFLDFVDRVLSLNQSQTIVKFRLHIHDVSVYSMLRINGFIH 181
           +DLDDS++LNP  +   S  F+DFVDRVL+L  +  + KF L I D      +RI  +I+
Sbjct: 50  LDLDDSVYLNPENETEISTSFMDFVDRVLALQGNSPLHKFSLKIGD--GIDPVRIIPWIN 107

Query: 182 NVILRNVVEIDLGIFLHFE 238
           NV+ R V ++DL + L  E
Sbjct: 108 NVLERGVSDLDLHLNLESE 126


>ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75245750|sp|Q8L7H1.1|FBL75_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g14103
           gi|22136642|gb|AAM91640.1| unknown protein [Arabidopsis
           thaliana] gi|332657972|gb|AEE83372.1| F-box/LRR-repeat
           protein [Arabidopsis thaliana]
          Length = 381

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/79 (43%), Positives = 49/79 (62%)
 Frame = +2

Query: 2   IDLDDSLHLNPSRKWSNSGLFLDFVDRVLSLNQSQTIVKFRLHIHDVSVYSMLRINGFIH 181
           +DLDDS++LNP  +   S  F+DFVDRVL+L  +  + KF L I D      +RI  +I+
Sbjct: 50  LDLDDSVYLNPENETEISTSFMDFVDRVLALQGNSPLHKFSLKIGD--GIDPVRIIPWIN 107

Query: 182 NVILRNVVEIDLGIFLHFE 238
           NV+ R V ++DL + L  E
Sbjct: 108 NVLERGVSDLDLHLNLESE 126


>ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75249810|sp|Q94B46.1|FBL74_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g14096
           gi|14596145|gb|AAK68800.1| Unknown protein [Arabidopsis
           thaliana] gi|22136112|gb|AAM91134.1| unknown protein
           [Arabidopsis thaliana] gi|332657971|gb|AEE83371.1|
           F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 468

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/79 (40%), Positives = 49/79 (62%)
 Frame = +2

Query: 2   IDLDDSLHLNPSRKWSNSGLFLDFVDRVLSLNQSQTIVKFRLHIHDVSVYSMLRINGFIH 181
           +DLD+S++LNP  +   S  F+DFVDRVL+L  +  + KF L I D       RI  +I+
Sbjct: 50  LDLDESVYLNPENETEVSSSFMDFVDRVLALQGNSPLHKFSLKIGD--GVEPDRIIPWIN 107

Query: 182 NVILRNVVEIDLGIFLHFE 238
           NV+ R V ++DL +++  E
Sbjct: 108 NVLERGVSDLDLHVYMETE 126


>emb|CAB10188.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268114|emb|CAB78451.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 1047

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/79 (40%), Positives = 49/79 (62%)
 Frame = +2

Query: 2   IDLDDSLHLNPSRKWSNSGLFLDFVDRVLSLNQSQTIVKFRLHIHDVSVYSMLRINGFIH 181
           +DLD+S++LNP  +   S  F+DFVDRVL+L  +  + KF L I D       RI  +I+
Sbjct: 305 LDLDESVYLNPENETEVSSSFMDFVDRVLALQGNSPLHKFSLKIGD--GVEPDRIIPWIN 362

Query: 182 NVILRNVVEIDLGIFLHFE 238
           NV+ R V ++DL +++  E
Sbjct: 363 NVLERGVSDLDLHVYMETE 381


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