BLASTX nr result

ID: Atractylodes22_contig00028912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028912
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containi...   125   5e-27
emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]   125   5e-27
ref|XP_002514151.1| pentatricopeptide repeat-containing protein,...   124   6e-27
ref|XP_002303271.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
gb|AFK43832.1| unknown [Lotus japonicus]                              123   1e-26

>ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690
           [Vitis vinifera]
          Length = 593

 Score =  125 bits (313), Expect = 5e-27
 Identities = 53/99 (53%), Positives = 74/99 (74%)
 Frame = +3

Query: 6   PNGETFRLVLLACAGVDAVQECLAHFGSMRNKYNIVPRIEHYLGVMDVLGTAGHLTEAVE 185
           PN +TF  VL  CA  +AV+E   HF SM+ +Y I P  EHY+G++DVLG +GH+ EA E
Sbjct: 347 PNEQTFLAVLSTCASAEAVEEGFIHFESMKTEYGITPTFEHYVGIIDVLGKSGHVIEAKE 406

Query: 186 FIENIPFEPTVEIWESLMNFARVHGDIEMEDHAEALLAS 302
           FIE +P EP+  +WE+LMN+A++HGDI++EDHAE L+ +
Sbjct: 407 FIEQMPVEPSAVVWEALMNYAKIHGDIDLEDHAEELMVA 445


>emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]
          Length = 627

 Score =  125 bits (313), Expect = 5e-27
 Identities = 53/99 (53%), Positives = 74/99 (74%)
 Frame = +3

Query: 6   PNGETFRLVLLACAGVDAVQECLAHFGSMRNKYNIVPRIEHYLGVMDVLGTAGHLTEAVE 185
           PN +TF  VL  CA  +AV+E   HF SM+ +Y I P  EHY+G++DVLG +GH+ EA E
Sbjct: 381 PNEQTFLAVLSTCASAEAVEEGFIHFESMKTEYGITPTFEHYVGIIDVLGKSGHVIEAKE 440

Query: 186 FIENIPFEPTVEIWESLMNFARVHGDIEMEDHAEALLAS 302
           FIE +P EP+  +WE+LMN+A++HGDI++EDHAE L+ +
Sbjct: 441 FIEQMPVEPSAVVWEALMNYAKIHGDIDLEDHAEELMVA 479


>ref|XP_002514151.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546607|gb|EEF48105.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 388

 Score =  124 bits (312), Expect = 6e-27
 Identities = 54/99 (54%), Positives = 76/99 (76%)
 Frame = +3

Query: 6   PNGETFRLVLLACAGVDAVQECLAHFGSMRNKYNIVPRIEHYLGVMDVLGTAGHLTEAVE 185
           P+  TF +V  AC+   A++E L  F ++RN+Y + PRI+HYLGV+D+LG AGHL EA E
Sbjct: 217 PDENTFSVVFAACSSAGAIKEGLLFFEALRNEYGMSPRIDHYLGVIDILGKAGHLCEAKE 276

Query: 186 FIENIPFEPTVEIWESLMNFARVHGDIEMEDHAEALLAS 302
           FIE +PFEPT+E+W +L +FA++HGDIE+EDH + LL +
Sbjct: 277 FIERMPFEPTMEVWMALRSFAQIHGDIELEDHVQQLLVA 315


>ref|XP_002303271.1| predicted protein [Populus trichocarpa] gi|222840703|gb|EEE78250.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  124 bits (312), Expect = 6e-27
 Identities = 56/99 (56%), Positives = 73/99 (73%)
 Frame = +3

Query: 6   PNGETFRLVLLACAGVDAVQECLAHFGSMRNKYNIVPRIEHYLGVMDVLGTAGHLTEAVE 185
           P GETF  VL ACA  +AV+E   +F  M  ++ I P +EHYL ++DVLG + +L EAVE
Sbjct: 88  PTGETFHAVLSACASAEAVEEGFLYFEEMSREFGISPTLEHYLSIIDVLGKSAYLNEAVE 147

Query: 186 FIENIPFEPTVEIWESLMNFARVHGDIEMEDHAEALLAS 302
           +IE +PFEPTVEIWE+L  +AR HGDI++EDHAE L+ S
Sbjct: 148 YIEKLPFEPTVEIWEALRKYARSHGDIDLEDHAEELIVS 186


>gb|AFK43832.1| unknown [Lotus japonicus]
          Length = 295

 Score =  123 bits (309), Expect = 1e-26
 Identities = 52/96 (54%), Positives = 73/96 (76%)
 Frame = +3

Query: 15  ETFRLVLLACAGVDAVQECLAHFGSMRNKYNIVPRIEHYLGVMDVLGTAGHLTEAVEFIE 194
           ET   VL AC   +AV++   HF SM++KY I P +EHY+G++DVLG +G+L EA EFIE
Sbjct: 52  ETLLAVLSACGSAEAVEDAFLHFDSMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEEFIE 111

Query: 195 NIPFEPTVEIWESLMNFARVHGDIEMEDHAEALLAS 302
            +PFEPT+ +WE+L N+AR+HGDI++EDH E L+ +
Sbjct: 112 KLPFEPTLTVWETLKNYARIHGDIDLEDHVEELMVN 147


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