BLASTX nr result

ID: Atractylodes22_contig00028877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028877
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634417.1| PREDICTED: RING-H2 finger protein ATL54-like...   209   1e-51
emb|CAN61577.1| hypothetical protein VITISV_008030 [Vitis vinifera]   206   8e-51
emb|CBI19211.3| unnamed protein product [Vitis vinifera]              204   4e-50
ref|XP_002513984.1| ring finger protein, putative [Ricinus commu...   201   3e-49
ref|XP_002301077.1| predicted protein [Populus trichocarpa] gi|2...   193   7e-47

>ref|XP_003634417.1| PREDICTED: RING-H2 finger protein ATL54-like [Vitis vinifera]
          Length = 404

 Score =  209 bits (531), Expect = 1e-51
 Identities = 127/314 (40%), Positives = 168/314 (53%), Gaps = 53/314 (16%)
 Frame = -1

Query: 1059 MAINHRKLLP-EPDSNQTTGCPD-CDYT-----YIYWXXXXXXXXXXXXXXXXXXXT--- 910
            MA+ HRKL P +  +NQ+  C D CD T     YIY                        
Sbjct: 1    MAMKHRKLFPTQTATNQSVDCLDFCDSTCPYNCYIYPDSLIPPPPPASPRPPTLSTLDQN 60

Query: 909  ---HMSPYLIVIVAVIGSALLFICYYLIMIRYCA----RFRQPPATQV--NENFMNEDHG 757
               ++SPY+I+ VA++    L +C+  I+++YC     R R PP+     +E F++E+ G
Sbjct: 61   DSPNISPYVIITVALLAGFFLLVCFNAIIVKYCCGWRRRNRSPPSESDGRDEEFLDENRG 120

Query: 756  PEIDHPIWYITTIGLQPAVINSIKVVKFNKDESLIEGTDCSVCLSEFEDDESLRLLPKCN 577
            P IDHPIW+ITT GLQ A+INSI V K+ + E LIEGT+CSVCLSEF++DE+LRLLPKCN
Sbjct: 121  PAIDHPIWFITTAGLQQAIINSITVCKYKRGEGLIEGTECSVCLSEFQEDETLRLLPKCN 180

Query: 576  HAFHIPCIDTWLRSHTNCPLCRAAILXXXXXXXXXXXXNH--GFGFNHNTQMEN-VEETQ 406
            HAFHIPCIDTWL SHTNCPLCRA I+             +    G N  TQMEN   +T+
Sbjct: 181  HAFHIPCIDTWLSSHTNCPLCRARIISDIVNPPLESNDQNSRSLGPNEQTQMENSSNDTE 240

Query: 405  IDDENRRENGVEVEDGSKG-------IQDSKTENE------------------------T 319
            +D+   R  GV      +G       + D +T  E                         
Sbjct: 241  LDNNLVRSRGVYESTVGRGGTGELQILDDERTSKEGVNSNGDVVLEVNGNSANNHVVDSE 300

Query: 318  VIPLRRSFSMDSAA 277
            + P+RRS SMDS++
Sbjct: 301  IQPVRRSVSMDSSS 314


>emb|CAN61577.1| hypothetical protein VITISV_008030 [Vitis vinifera]
          Length = 404

 Score =  206 bits (524), Expect = 8e-51
 Identities = 126/314 (40%), Positives = 167/314 (53%), Gaps = 53/314 (16%)
 Frame = -1

Query: 1059 MAINHRKLLP-EPDSNQTTGCPD-CDYT-----YIYWXXXXXXXXXXXXXXXXXXXT--- 910
            MA+ HRKL P +  +NQ+  C D CD T     YIY                        
Sbjct: 1    MAMKHRKLFPTQTATNQSVDCLDFCDSTCPYNCYIYPDSLIPPPPPASPRPPTLSTLDQN 60

Query: 909  ---HMSPYLIVIVAVIGSALLFICYYLIMIRYCA----RFRQPPATQV--NENFMNEDHG 757
               ++SPY+I+ VA++    L +C+  I+++YC     R R PP+     +E F++E+ G
Sbjct: 61   DSPNISPYVIITVALLAGFFLLVCFNAIIVKYCCGWRRRNRSPPSESDGRDEEFLDENRG 120

Query: 756  PEIDHPIWYITTIGLQPAVINSIKVVKFNKDESLIEGTDCSVCLSEFEDDESLRLLPKCN 577
            P IDHPIW+ITT GLQ A+INSI V K+ + E LIEGT+CSVCLSEF++DE+LRLLPKCN
Sbjct: 121  PAIDHPIWFITTAGLQQAIINSITVCKYKRGEGLIEGTECSVCLSEFQEDETLRLLPKCN 180

Query: 576  HAFHIPCIDTWLRSHTNCPLCRAAILXXXXXXXXXXXXNH--GFGFNHNTQMEN-VEETQ 406
            HAFHIPCIDTWL SHTNCPLCRA I+             +    G N  TQMEN   +T+
Sbjct: 181  HAFHIPCIDTWLSSHTNCPLCRARIISDIVNPPLESNDQNSRSLGPNEQTQMENSSNDTE 240

Query: 405  IDDENRRENGVEVEDGSKG-------IQDSKTENE------------------------T 319
            + +   R  GV      +G       + D +T  E                         
Sbjct: 241  LXNNLVRSRGVYESTVGRGGTGELQILDDERTSKEGVNSNGDVVLEVNGNSANNHVVDSE 300

Query: 318  VIPLRRSFSMDSAA 277
            + P+RRS SMDS++
Sbjct: 301  IQPVRRSVSMDSSS 314


>emb|CBI19211.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  204 bits (518), Expect = 4e-50
 Identities = 113/251 (45%), Positives = 148/251 (58%), Gaps = 22/251 (8%)
 Frame = -1

Query: 1059 MAINHRKLLP-EPDSNQTTGCPD-CDYT-----YIYWXXXXXXXXXXXXXXXXXXXT--- 910
            MA+ HRKL P +  +NQ+  C D CD T     YIY                        
Sbjct: 23   MAMKHRKLFPTQTATNQSVDCLDFCDSTCPYNCYIYPDSLIPPPPPASPRPPTLSTLDQN 82

Query: 909  ---HMSPYLIVIVAVIGSALLFICYYLIMIRYCA----RFRQPPATQV--NENFMNEDHG 757
               ++SPY+I+ VA++    L +C+  I+++YC     R R PP+     +E F++E+ G
Sbjct: 83   DSPNISPYVIITVALLAGFFLLVCFNAIIVKYCCGWRRRNRSPPSESDGRDEEFLDENRG 142

Query: 756  PEIDHPIWYITTIGLQPAVINSIKVVKFNKDESLIEGTDCSVCLSEFEDDESLRLLPKCN 577
            P IDHPIW+ITT GLQ A+INSI V K+ + E LIEGT+CSVCLSEF++DE+LRLLPKCN
Sbjct: 143  PAIDHPIWFITTAGLQQAIINSITVCKYKRGEGLIEGTECSVCLSEFQEDETLRLLPKCN 202

Query: 576  HAFHIPCIDTWLRSHTNCPLCRAAILXXXXXXXXXXXXNH--GFGFNHNTQMEN-VEETQ 406
            HAFHIPCIDTWL SHTNCPLCRA I+             +    G N  TQMEN   +T+
Sbjct: 203  HAFHIPCIDTWLSSHTNCPLCRARIISDIVNPPLESNDQNSRSLGPNEQTQMENSSNDTE 262

Query: 405  IDDENRRENGV 373
            +D+      G+
Sbjct: 263  LDNNLMNPKGI 273


>ref|XP_002513984.1| ring finger protein, putative [Ricinus communis]
            gi|223547070|gb|EEF48567.1| ring finger protein, putative
            [Ricinus communis]
          Length = 393

 Score =  201 bits (511), Expect = 3e-49
 Identities = 127/325 (39%), Positives = 168/325 (51%), Gaps = 50/325 (15%)
 Frame = -1

Query: 1053 INHRKLLPE-PDSNQTTGCPD-----CDYT-YIYWXXXXXXXXXXXXXXXXXXXTHMSPY 895
            + HRKL P    +NQT  CPD     C Y  Y Y                     H+SPY
Sbjct: 1    MKHRKLFPSLSTTNQTVDCPDFCDPACPYNCYPYADYYFLPPPPPPPPPLLPQEHHLSPY 60

Query: 894  LIVIVAVIGSALLFICYYLIMIRYCA--------RFRQPPATQVNENFMNEDHGPEIDHP 739
            +I++V+V+ S  L + YY+I+ + C         R  Q  A   +E F++E+   ++DHP
Sbjct: 61   VIILVSVLASFFLVVSYYVIIAKSCPGWCSSRNNRAPQSEADNTDEEFLDEN---QVDHP 117

Query: 738  IWYITTIGLQPAVINSIKVVKFNKDESLIEGTDCSVCLSEFEDDESLRLLPKCNHAFHIP 559
            IW+ITT GLQ ++INSI V K+ K E LIEGT+CSVCLSEF+ DE+LRLLPKCNHAFHI 
Sbjct: 118  IWFITTAGLQQSIINSITVCKYKKGEGLIEGTECSVCLSEFQQDETLRLLPKCNHAFHIS 177

Query: 558  CIDTWLRSHTNCPLCRAAILXXXXXXXXXXXXNHGFGFNH--NTQMENVE------ETQI 403
            CIDTWLRSHTNCPLCRA I+             +    N   +TQM+N E       TQ 
Sbjct: 178  CIDTWLRSHTNCPLCRAHIVHDPVPTPLISINQNPDNLNTIISTQMDNSEIDGELSNTQE 237

Query: 402  DDENRR---ENGVEVEDGSKGI--------------------QDSKTENETVIPLRRSFS 292
             +ENR    E G  V  GS+                       D +     + P+RRS S
Sbjct: 238  RNENRAAADEGGETVHVGSERTLKEDVNSANSDNFEIFCDSGNDHQVAKSDIQPMRRSVS 297

Query: 291  MDSAAEMV----LRESNSTTELQSS 229
            MDS   +     L+++ S  +L+ +
Sbjct: 298  MDSLTAVTTNSSLKDTTSPIDLEEN 322


>ref|XP_002301077.1| predicted protein [Populus trichocarpa] gi|222842803|gb|EEE80350.1|
            predicted protein [Populus trichocarpa]
          Length = 389

 Score =  193 bits (490), Expect = 7e-47
 Identities = 124/307 (40%), Positives = 162/307 (52%), Gaps = 48/307 (15%)
 Frame = -1

Query: 1059 MAINHRKLLP-EPDSNQTTGCPD-----CDYTYIYWXXXXXXXXXXXXXXXXXXXTHMSP 898
            MA+ HRKL P   ++NQT  CPD     C Y   Y                     H+SP
Sbjct: 1    MAMKHRKLFPIGTETNQTIDCPDFCDPACPYN-CYPYSDYYLLPPPPPPPFLPQEHHLSP 59

Query: 897  YLIVIVAVIGSALLFICYYLIMIRYCARF------RQPPATQ--VNENFMNEDHGPEIDH 742
            Y+I+IVA++ S  L + YY+I+ + C+ +       +P A +   +E F++E+    +DH
Sbjct: 60   YVIIIVALLASFFLIVSYYVIVAKSCSGWCGSRNNTEPQAQEDDTDEEFLDENR---VDH 116

Query: 741  PIWYITTIGLQPAVINSIKVVKFNKDESLIEGTDCSVCLSEFEDDESLRLLPKCNHAFHI 562
            PIW+ITTIGLQ ++INSI V K+ K E LIEGT+CSVCLSEF+ DE+LRLLPKCNHAFHI
Sbjct: 117  PIWFITTIGLQQSIINSITVCKYKKGEGLIEGTECSVCLSEFQQDETLRLLPKCNHAFHI 176

Query: 561  PCIDTWLRSHTNCPLCRAAILXXXXXXXXXXXXNHGFGFN--HNTQMENV---------E 415
             CIDTWLRSHTNCPLCR  I+             +    N   +TQMEN          +
Sbjct: 177  SCIDTWLRSHTNCPLCRTHIINGPASTPLISVGQNHDNLNPTFSTQMENSDVDSGLGNNQ 236

Query: 414  ETQIDDENR-------------RENGVEVEDGSKGIQD----------SKTENETVIPLR 304
            E+    ENR              E  ++ E  S  I D           + E+  +  LR
Sbjct: 237  ESNEPCENRAGTEEVGEILQVGEERTLKDEVNSNDIGDLQVLCSSVDKHQAEDNDIKLLR 296

Query: 303  RSFSMDS 283
            RS SMDS
Sbjct: 297  RSSSMDS 303


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