BLASTX nr result

ID: Atractylodes22_contig00028861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028861
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276726.1| PREDICTED: regulation of nuclear pre-mRNA do...   105   5e-21
ref|XP_002309998.1| predicted protein [Populus trichocarpa] gi|2...   104   8e-21
ref|XP_002528993.1| conserved hypothetical protein [Ricinus comm...   100   2e-19
ref|XP_002306332.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_003525068.1| PREDICTED: uncharacterized protein LOC100802...    80   1e-13

>ref|XP_002276726.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
           2-like [Vitis vinifera]
          Length = 524

 Score =  105 bits (261), Expect = 5e-21
 Identities = 67/170 (39%), Positives = 76/170 (44%), Gaps = 20/170 (11%)
 Frame = +2

Query: 2   SNSFPANNSVSKPEQPLPVSDHNVFMPPQTLNLSANGPYQTVLVPQPTL---IPNSQAQY 172
           SNSF    S SKPE  +PVSD NVFM  QTL    N PYQ+V++  PT+    P SQ QY
Sbjct: 364 SNSFTPMPSNSKPENSMPVSDPNVFMSTQTLTAPPNQPYQSVIIAPPTMQSQTPTSQTQY 423

Query: 173 HTLPNPHSQQYLQPSGGIVTSYAYGN-----------------VXXXXXXXXXXXXXXXX 301
           H LPNP SQQYLQPSGGI+  Y YG+                 V                
Sbjct: 424 HMLPNPPSQQYLQPSGGIMNPYGYGSIPPLPPGPPPPPSTLHMVNPMAPLPQQQSIPLVQ 483

Query: 302 XXXXXXXHQPMQMTHQMXXXXXXXXXXXXXXXXXXXXSGMVFYAHPHHSQ 451
                  HQPM +T Q                      GMV+Y  PHHSQ
Sbjct: 484 QPALLTRHQPMPLTQQ---------PPAPPSFRPLQLPGMVYYGLPHHSQ 524


>ref|XP_002309998.1| predicted protein [Populus trichocarpa] gi|222852901|gb|EEE90448.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  104 bits (259), Expect = 8e-21
 Identities = 60/147 (40%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
 Frame = +2

Query: 17  ANNSVSKPEQPLPVSDHNVFMPPQTLNLSANGPYQTVLVPQPTL---IPNSQAQYHTLPN 187
           A +S+SKPE  LPVSD NVFMP Q L       YQ+VL+PQP++    P++QAQ+H LPN
Sbjct: 349 AYDSLSKPENSLPVSDPNVFMPAQPLAAPTTHSYQSVLLPQPSMQNQTPSAQAQFHMLPN 408

Query: 188 PHSQQYLQPSGGIVTSYAYGNVXXXXXXXXXXXXXXXXXXXXXXXHQPMQMTHQMXXXXX 367
             SQQYLQP+GGI+T YAYGN+                        Q M +  Q      
Sbjct: 409 QSSQQYLQPAGGIMTPYAYGNISPLPPGPPPPPPPPPPYMATINQQQQMSLNQQ------ 462

Query: 368 XXXXXXXXXXXXXXXSGMVFYAHPHHS 448
                           GMV+Y HP HS
Sbjct: 463 ----PQGPNFRPLRPHGMVYYGHPSHS 485


>ref|XP_002528993.1| conserved hypothetical protein [Ricinus communis]
           gi|223531583|gb|EEF33412.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 514

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/77 (59%), Positives = 59/77 (76%), Gaps = 3/77 (3%)
 Frame = +2

Query: 32  SKPEQPLPVSDHNVFMPPQTLNLSANGPYQTVLVPQPTL---IPNSQAQYHTLPNPHSQQ 202
           SKPE+ LP+SD NVFMP Q+L   +N  YQ+V++  PT+    P+SQAQYH LPNP SQQ
Sbjct: 360 SKPEKSLPISDPNVFMPAQSLTAPSNHSYQSVMLAPPTMQNQAPSSQAQYHMLPNPPSQQ 419

Query: 203 YLQPSGGIVTSYAYGNV 253
           Y+QPSGGI+T Y YG++
Sbjct: 420 YMQPSGGIITPYGYGSI 436


>ref|XP_002306332.1| predicted protein [Populus trichocarpa] gi|222855781|gb|EEE93328.1|
           predicted protein [Populus trichocarpa]
          Length = 529

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 5/88 (5%)
 Frame = +2

Query: 2   SNSFPAN--NSVSKPEQPLPVSDHNVFMPPQTLNLSANGPYQTVLVPQPTL---IPNSQA 166
           SNS+ +    S+SKPE  LPVSD NVFMP Q L       YQ VL+PQPT+    P +QA
Sbjct: 368 SNSYASMPVQSLSKPENSLPVSDSNVFMPAQPLAAPTTHSYQPVLLPQPTMPNQTPTTQA 427

Query: 167 QYHTLPNPHSQQYLQPSGGIVTSYAYGN 250
           Q+    NP SQQYLQP+GGI+T YAYGN
Sbjct: 428 QF----NPSSQQYLQPAGGIMTPYAYGN 451


>ref|XP_003525068.1| PREDICTED: uncharacterized protein LOC100802429 [Glycine max]
          Length = 509

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 46/114 (40%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
 Frame = +2

Query: 20  NNSVSKPEQPLPVSDHNVFMPPQTLNLSANGPYQTVLVPQPTL---IPNSQAQYHTLPNP 190
           + ++SKPE+ +P+SD NVFM  Q L  + N  Y +VLVPQPTL      SQ QY  L N 
Sbjct: 359 SETMSKPEKSIPISDPNVFMTSQQLIATPNHSYPSVLVPQPTLQNPAAASQGQYQMLCNS 418

Query: 191 HSQQYLQPSGGIVTSYAYGNVXXXXXXXXXXXXXXXXXXXXXXXHQPMQMTHQM 352
            SQ YLQ +GG+++SY YG++                       HQ MQ+T Q+
Sbjct: 419 SSQHYLQSTGGVISSYGYGSI---APLPLGPPPPHMVGPMVPLTHQTMQITQQL 469


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