BLASTX nr result

ID: Atractylodes22_contig00028850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028850
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272667.2| PREDICTED: TMV resistance protein N-like [Vi...    68   7e-10
emb|CBI23849.3| unnamed protein product [Vitis vinifera]               68   7e-10
ref|XP_002272820.2| PREDICTED: TMV resistance protein N-like, pa...    67   1e-09
ref|XP_002273151.1| PREDICTED: TMV resistance protein N-like [Vi...    64   1e-08
ref|XP_002329162.1| tir-nbs-lrr resistance protein [Populus tric...    60   2e-07

>ref|XP_002272667.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1261

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 13/125 (10%)
 Frame = -1

Query: 336  LPSGIQVLRARGCSSLEKIGDLSQEYEWL----YKVWFIDCHKLLEDQENERYIDKMLQ- 172
            LPS I+ L A  C+SLE   + S  Y W         F +C +L+E+++++  ++ +L+ 
Sbjct: 1014 LPSNIEKLLANDCTSLETFSNPSSAYAWRNSRHLNFQFYNCFRLVENEQSDN-VEAILRG 1072

Query: 171  ---QSFLKKCAAVDHRL---SIVVPGSKIPSWFKEQR-GCNVALRLPPK-PHTQVMGFAI 16
                + +    A  + L     VVPGS IP WF +Q  GC+V + LPP    T++MG A+
Sbjct: 1073 IRLVASISNFVAPHYELKWYDAVVPGSSIPEWFTDQSLGCSVTVELPPHWCTTRLMGLAV 1132

Query: 15   CGVFH 1
            C VFH
Sbjct: 1133 CFVFH 1137


>emb|CBI23849.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 13/125 (10%)
 Frame = -1

Query: 336 LPSGIQVLRARGCSSLEKIGDLSQEYEWL----YKVWFIDCHKLLEDQENERYIDKMLQ- 172
           LPS I+ L A  C+SLE   + S  Y W         F +C +L+E+++++  ++ +L+ 
Sbjct: 621 LPSNIEKLLANDCTSLETFSNPSSAYAWRNSRHLNFQFYNCFRLVENEQSDN-VEAILRG 679

Query: 171 ---QSFLKKCAAVDHRL---SIVVPGSKIPSWFKEQR-GCNVALRLPPK-PHTQVMGFAI 16
               + +    A  + L     VVPGS IP WF +Q  GC+V + LPP    T++MG A+
Sbjct: 680 IRLVASISNFVAPHYELKWYDAVVPGSSIPEWFTDQSLGCSVTVELPPHWCTTRLMGLAV 739

Query: 15  CGVFH 1
           C VFH
Sbjct: 740 CFVFH 744


>ref|XP_002272820.2| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 1296

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 47/130 (36%), Positives = 71/130 (54%), Gaps = 18/130 (13%)
 Frame = -1

Query: 336  LPSGIQVLRARGCSSLEKIGDLSQEYEW-----LYKVWFIDCHKLLEDQENERYIDKMLQ 172
            LPS ++ L A  C+SLE I + S  Y W     LY   F +C +L+E+++++  ++ +L+
Sbjct: 1019 LPSSVEELLANDCTSLETISNPSSAYAWRNSGHLYSE-FCNCFRLVENEQSDN-VEAILR 1076

Query: 171  QSFLKKC-------AAVDHRLSI----VVPGSKIPSWFKEQ-RGCNVALRLPPK-PHTQV 31
               L          + +   LSI    VVPGS IP WF  Q   C+V + LPP   +T++
Sbjct: 1077 GIRLVASIPNSVAPSDIQRDLSIVYDAVVPGSSIPEWFTHQSERCSVTVELPPHWCNTRL 1136

Query: 30   MGFAICGVFH 1
            MG A+C VFH
Sbjct: 1137 MGLAVCVVFH 1146


>ref|XP_002273151.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1468

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 22/134 (16%)
 Frame = -1

Query: 336  LPSGIQVLRARGCSSLEKIGDLSQEYEWL----YKVWFIDCHKLLEDQENE--------- 196
            LPS I  L A  C+SLE I  LS  +       +   F +C +L+E+++++         
Sbjct: 1088 LPSSIIELLANDCTSLENISYLSSGFVLRKFCDFNFEFCNCFRLMENEQSDTLEAILLAI 1147

Query: 195  -------RYIDKMLQQSFLKKCAAVDHRLSIVVPGSKIPSWFKEQR-GCNVALRLPPKPH 40
                   +++D M   S     + + +    VVPGS IP WF +Q  GC+V + LPP  +
Sbjct: 1148 RRFASVTKFMDPMDYSSLRTFASRIPY--DAVVPGSSIPEWFTDQSVGCSVTVELPPHWY 1205

Query: 39   -TQVMGFAICGVFH 1
             T+++G A+C VFH
Sbjct: 1206 TTRLIGLAVCAVFH 1219


>ref|XP_002329162.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222870943|gb|EEF08074.1| tir-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1203

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
 Frame = -1

Query: 336  LPSGIQVLRARGCSSLEKIGDLSQEYEWLY-KVWFIDCHKLLEDQENERYIDKMLQQSFL 160
            LPS ++  R  GC+SLEK+    +  +  Y +  FI+C +L E          +L++ F 
Sbjct: 946  LPSNLEEFRVNGCTSLEKMQFSRKLCQLNYLRYLFINCWRLSESDCWNNMFPTLLRKCFQ 1005

Query: 159  KKCAAVDHRLSIVVPGSKIPSWFKEQ-RGCNVALRLPPKPH--TQVMGFAIC 13
                 ++   S+++PGS+IP+WF  Q  G +V+++ PP  H   + +G+A+C
Sbjct: 1006 GPPNLIES-FSVIIPGSEIPTWFSHQSEGSSVSVQTPPHSHENDEWLGYAVC 1056


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