BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028837
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...    79   3e-13
dbj|BAA22288.1| polyprotein [Oryza australiensis]                      77   2e-12
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...    76   2e-12
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...    76   3e-12
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...    76   3e-12

>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/86 (45%), Positives = 63/86 (73%), Gaps = 4/86 (4%)
 Frame = -3

Query: 252 EELDRLGITLGTELSTDMILNSLPASYDQFILNYNMNNWEKSISELHLMLKTAENNIPRR 73
           + L++LG  L  EL+TD+IL SLPASY QFILN++MN  +K+++ELH++LKTAE++I + 
Sbjct: 232 QSLEKLGFPLSQELATDLILASLPASYGQFILNFHMNGLDKNLTELHMLLKTAEDSIKKI 291

Query: 72  PAQALMIREGGIKKPQA----QGQGK 7
            +  +M+++    K +A    +G+GK
Sbjct: 292 NSHVMMVQKSTSFKKKARTWVKGKGK 317


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/76 (47%), Positives = 53/76 (69%)
 Frame = -3

Query: 255 IEELDRLGITLGTELSTDMILNSLPASYDQFILNYNMNNWEKSISELHLMLKTAENNIPR 76
           IE L++LG  L  EL+TD+IL SLP S++ FILNY+MNN +++++ELH MLKT E +I +
Sbjct: 145 IESLEKLGFPLSQELATDVILQSLPPSFEPFILNYHMNNMDRTLAELHGMLKTVEESIQK 204

Query: 75  RPAQALMIREGGIKKP 28
                +M++    K P
Sbjct: 205 NGHHVMMMQNAKRKPP 220


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/84 (44%), Positives = 58/84 (69%)
 Frame = -3

Query: 252 EELDRLGITLGTELSTDMILNSLPASYDQFILNYNMNNWEKSISELHLMLKTAENNIPRR 73
           + L++LG  L  EL+TD+IL SLP SY QFILN++MN  +K+++ELH+MLKTAE ++ + 
Sbjct: 149 QSLEKLGFPLSQELATDLILASLPESYGQFILNFHMNGLDKNLTELHMMLKTAEGSVKKC 208

Query: 72  PAQALMIREGGIKKPQAQGQGKNK 1
               +M+++    K +A+   K K
Sbjct: 209 NNHVIMVQKSTSFKKKAKTWIKKK 232


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/84 (42%), Positives = 57/84 (67%)
 Frame = -3

Query: 252 EELDRLGITLGTELSTDMILNSLPASYDQFILNYNMNNWEKSISELHLMLKTAENNIPRR 73
           E LD+LG  L  EL+TD+IL SLP S++ FI+N+NMNN  ++++ELH MLKTAE +I + 
Sbjct: 224 ESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRTLAELHGMLKTAEESIKKN 283

Query: 72  PAQALMIREGGIKKPQAQGQGKNK 1
               +++ +   +KP  +  G+ +
Sbjct: 284 SNHVMVMHK---RKPNNKKSGQKR 304


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1248

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/84 (42%), Positives = 57/84 (67%)
 Frame = -3

Query: 252 EELDRLGITLGTELSTDMILNSLPASYDQFILNYNMNNWEKSISELHLMLKTAENNIPRR 73
           E LD+LG  L  EL+TD+IL SLP S++ FI+N+NMNN  ++++ELH MLKTAE +I + 
Sbjct: 212 ESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRTLAELHGMLKTAEESIKKN 271

Query: 72  PAQALMIREGGIKKPQAQGQGKNK 1
               +++ +   +KP  +  G+ +
Sbjct: 272 SNHVMVMHK---RKPNNKKSGQKR 292