BLASTX nr result

ID: Atractylodes22_contig00028834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028834
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307496.1| predicted protein [Populus trichocarpa] gi|3...   107   1e-21
ref|XP_002300922.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_003564692.1| PREDICTED: U6 snRNA-associated Sm-like prote...   107   1e-21
ref|XP_003564691.1| PREDICTED: U6 snRNA-associated Sm-like prote...   107   1e-21
dbj|BAK02536.1| predicted protein [Hordeum vulgare subsp. vulgare]    107   1e-21

>ref|XP_002307496.1| predicted protein [Populus trichocarpa]
           gi|359493111|ref|XP_002266320.2| PREDICTED: U6
           snRNA-associated Sm-like protein LSm3-like isoform 1
           [Vitis vinifera] gi|222856945|gb|EEE94492.1| predicted
           protein [Populus trichocarpa]
          Length = 97

 Score =  107 bits (267), Expect = 1e-21
 Identities = 53/54 (98%), Positives = 54/54 (100%)
 Frame = -3

Query: 370 HLNMILGDVEEIVTTVEIDDETYEEIVRSTRRTVPFLFVRGDGVILVSPPLRTA 209
           HLNMILGDVEEIVTTVEIDDETYEEIVR+TRRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 44  HLNMILGDVEEIVTTVEIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 97


>ref|XP_002300922.1| predicted protein [Populus trichocarpa] gi|222842648|gb|EEE80195.1|
           predicted protein [Populus trichocarpa]
          Length = 97

 Score =  107 bits (267), Expect = 1e-21
 Identities = 53/54 (98%), Positives = 54/54 (100%)
 Frame = -3

Query: 370 HLNMILGDVEEIVTTVEIDDETYEEIVRSTRRTVPFLFVRGDGVILVSPPLRTA 209
           HLNMILGDVEEIVTTVEIDDETYEEIVR+TRRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 44  HLNMILGDVEEIVTTVEIDDETYEEIVRATRRTVPFLFVRGDGVILVSPPLRTA 97


>ref|XP_003564692.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like isoform 2
           [Brachypodium distachyon]
          Length = 114

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/54 (96%), Positives = 54/54 (100%)
 Frame = -3

Query: 370 HLNMILGDVEEIVTTVEIDDETYEEIVRSTRRTVPFLFVRGDGVILVSPPLRTA 209
           HLNMILGDVEEIVTTVEIDDETYEEIVR+TRRT+PFLFVRGDGVILVSPPLRTA
Sbjct: 61  HLNMILGDVEEIVTTVEIDDETYEEIVRTTRRTIPFLFVRGDGVILVSPPLRTA 114


>ref|XP_003564691.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like isoform 1
           [Brachypodium distachyon]
          Length = 98

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/54 (96%), Positives = 54/54 (100%)
 Frame = -3

Query: 370 HLNMILGDVEEIVTTVEIDDETYEEIVRSTRRTVPFLFVRGDGVILVSPPLRTA 209
           HLNMILGDVEEIVTTVEIDDETYEEIVR+TRRT+PFLFVRGDGVILVSPPLRTA
Sbjct: 45  HLNMILGDVEEIVTTVEIDDETYEEIVRTTRRTIPFLFVRGDGVILVSPPLRTA 98


>dbj|BAK02536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 121

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/54 (96%), Positives = 54/54 (100%)
 Frame = -3

Query: 370 HLNMILGDVEEIVTTVEIDDETYEEIVRSTRRTVPFLFVRGDGVILVSPPLRTA 209
           HLNMILGDVEEIVTTVEIDDETYEEIVR+TRRT+PFLFVRGDGVILVSPPLRTA
Sbjct: 68  HLNMILGDVEEIVTTVEIDDETYEEIVRTTRRTIPFLFVRGDGVILVSPPLRTA 121


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