BLASTX nr result

ID: Atractylodes22_contig00028790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028790
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535497.1| conserved hypothetical protein [Ricinus comm...    60   8e-14
emb|CBI26620.3| unnamed protein product [Vitis vinifera]               62   4e-08
ref|XP_002886888.1| hypothetical protein ARALYDRAFT_475597 [Arab...    43   4e-07
gb|AFK44984.1| unknown [Medicago truncatula]                           40   5e-07
ref|XP_003618685.1| Photosystem I assembly protein ycf3 [Medicag...    58   7e-07

>ref|XP_002535497.1| conserved hypothetical protein [Ricinus communis]
           gi|223522895|gb|EEF26886.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 110

 Score = 60.5 bits (145), Expect(2) = 8e-14
 Identities = 35/56 (62%), Positives = 37/56 (66%)
 Frame = -1

Query: 255 SILDSSIERKVIPIGSVLRGNPSPLVPIGSRGEEALHLGINNTKTLL*IIP*QAWD 88
           SI+DSSIERKV         NP+PLVPIG   EEAL LGINNTK LL I P   WD
Sbjct: 62  SIVDSSIERKV---------NPTPLVPIGGIKEEALRLGINNTKPLLEIFPFPYWD 108



 Score = 41.2 bits (95), Expect(2) = 8e-14
 Identities = 27/64 (42%), Positives = 29/64 (45%)
 Frame = -2

Query: 452 KEAFTYYRDGAI*FFYFLFIPITNHVCLS*DGE**KKSTLVEGKVWK*NNSFCRVSSINA 273
           KEAFTYYRDG                                 +V+K NNSFCRVS INA
Sbjct: 31  KEAFTYYRDG---------------------------------EVYKENNSFCRVSPINA 57

Query: 272 ASDA 261
           ASDA
Sbjct: 58  ASDA 61


>emb|CBI26620.3| unnamed protein product [Vitis vinifera]
          Length = 453

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/39 (76%), Positives = 33/39 (84%)
 Frame = +2

Query: 107 IIYNKVFVLLIPRCSASSPLLPIGTSGLGLPRNTEPIGI 223
           +IYNKVFVLLIPRCSASSP+  IGTSG+GL  N E IGI
Sbjct: 405 VIYNKVFVLLIPRCSASSPISTIGTSGVGLTSNIEHIGI 443


>ref|XP_002886888.1| hypothetical protein ARALYDRAFT_475597 [Arabidopsis lyrata subsp.
          lyrata] gi|297332729|gb|EFH63147.1| hypothetical
          protein ARALYDRAFT_475597 [Arabidopsis lyrata subsp.
          lyrata]
          Length = 60

 Score = 42.7 bits (99), Expect(2) = 4e-07
 Identities = 17/24 (70%), Positives = 23/24 (95%)
 Frame = +1

Query: 25 MVIRVSKIQTRWMFVVPTILLVPS 96
          MVIRVSK++TRWMF+VPT+L+ P+
Sbjct: 1  MVIRVSKVRTRWMFIVPTMLISPN 24



 Score = 36.2 bits (82), Expect(2) = 4e-07
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +2

Query: 104 GIIYNKVFVLLIPRCSASSPLLPI 175
           GII+ KVFVLLI R SASSP+ PI
Sbjct: 33  GIIFKKVFVLLISRRSASSPMPPI 56


>gb|AFK44984.1| unknown [Medicago truncatula]
          Length = 63

 Score = 40.4 bits (93), Expect(2) = 5e-07
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = +1

Query: 25 MVIRVSKIQTRWMFVVPTILLVP 93
          MVI VSKI+TRWMF+VPTIL+ P
Sbjct: 1  MVIWVSKIRTRWMFIVPTILVSP 23



 Score = 38.1 bits (87), Expect(2) = 5e-07
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = +2

Query: 128 VLLIPRCSASSPLLPIGTSGLGL 196
           VLLIP+ SASSP+ PIGTSG+GL
Sbjct: 40  VLLIPKRSASSPMPPIGTSGVGL 62


>ref|XP_003618685.1| Photosystem I assembly protein ycf3 [Medicago truncatula]
           gi|358344504|ref|XP_003636329.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
           gi|358349399|ref|XP_003638725.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
           gi|355493700|gb|AES74903.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
           gi|355502264|gb|AES83467.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
           gi|355504660|gb|AES85863.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
          Length = 66

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/24 (95%), Positives = 23/24 (95%)
 Frame = -1

Query: 81  NGWDNKHPSRLYFGYPYNHRRLLK 10
           NGWDNKHPSR YFGYPYNHRRLLK
Sbjct: 43  NGWDNKHPSRSYFGYPYNHRRLLK 66


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