BLASTX nr result

ID: Atractylodes22_contig00028674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028674
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vini...   214   6e-54
ref|XP_004144345.1| PREDICTED: DNA polymerase I-like [Cucumis sa...   206   2e-51
ref|NP_190773.2| 5'-3' exonuclease-like protein [Arabidopsis tha...   206   2e-51
ref|XP_002876121.1| hypothetical protein ARALYDRAFT_485561 [Arab...   206   2e-51
ref|NP_001078270.1| 5'-3' exonuclease-like protein [Arabidopsis ...   206   2e-51

>ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vinifera]
           gi|296084279|emb|CBI24667.3| unnamed protein product
           [Vitis vinifera]
          Length = 441

 Score =  214 bits (545), Expect = 6e-54
 Identities = 106/129 (82%), Positives = 114/129 (88%)
 Frame = -2

Query: 389 SNGRVMLIDGTSIIYRSYYKLLANLHHGHLSNADGNGDWVLTISKALSLIIDVLEFTPSH 210
           SNGRVMLIDGTSIIYR+YYKLLA LHHG+LS+ADGNGDWVLTI  ALSLI+DVL+F PSH
Sbjct: 109 SNGRVMLIDGTSIIYRAYYKLLAKLHHGYLSHADGNGDWVLTIFAALSLIVDVLDFIPSH 168

Query: 209 VAVVFDHDGFCFGNMPQSPTQKFMAKGHTFRHTLYPSYKSNRPPTPDTIVQGLQYLKASI 30
           VAVVFDH+G  FG+   S  +  MAKG  FRHTLYPSYKSNRPPTPDTIVQGLQYLKASI
Sbjct: 169 VAVVFDHNGIPFGHTSISSKESIMAKGLNFRHTLYPSYKSNRPPTPDTIVQGLQYLKASI 228

Query: 29  KAMSIKVIE 3
           KAMSIKVIE
Sbjct: 229 KAMSIKVIE 237


>ref|XP_004144345.1| PREDICTED: DNA polymerase I-like [Cucumis sativus]
          Length = 461

 Score =  206 bits (523), Expect = 2e-51
 Identities = 99/129 (76%), Positives = 113/129 (87%)
 Frame = -2

Query: 389 SNGRVMLIDGTSIIYRSYYKLLANLHHGHLSNADGNGDWVLTISKALSLIIDVLEFTPSH 210
           ++ RVMLIDGTSII+R+YYKLLA LHHGHLS+ADGNGDWVLTI  ALSLI+DVLE  PSH
Sbjct: 129 ADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSLIVDVLEIMPSH 188

Query: 209 VAVVFDHDGFCFGNMPQSPTQKFMAKGHTFRHTLYPSYKSNRPPTPDTIVQGLQYLKASI 30
           VAVVFDHDG  +G+   S  + FM+KG TFRHT+YP+YKSNR PTPDT+VQGLQYLKASI
Sbjct: 189 VAVVFDHDGHPYGHTYISSNENFMSKGSTFRHTIYPAYKSNRAPTPDTVVQGLQYLKASI 248

Query: 29  KAMSIKVIE 3
           K+MSIKVIE
Sbjct: 249 KSMSIKVIE 257


>ref|NP_190773.2| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
           gi|145362483|ref|NP_974414.2| 5'-3' exonuclease-like
           protein [Arabidopsis thaliana]
           gi|109946597|gb|ABG48477.1| At3g52050 [Arabidopsis
           thaliana] gi|332645358|gb|AEE78879.1| 5'-3'
           exonuclease-like protein [Arabidopsis thaliana]
           gi|332645359|gb|AEE78880.1| 5'-3' exonuclease-like
           protein [Arabidopsis thaliana]
          Length = 425

 Score =  206 bits (523), Expect = 2e-51
 Identities = 102/129 (79%), Positives = 111/129 (86%)
 Frame = -2

Query: 389 SNGRVMLIDGTSIIYRSYYKLLANLHHGHLSNADGNGDWVLTISKALSLIIDVLEFTPSH 210
           SNGRVMLIDGTSIIYR+YYKLLA L+HGHL++ADGN DWVLTI  +LSL+IDVL+F PSH
Sbjct: 92  SNGRVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWVLTIFSSLSLLIDVLKFLPSH 151

Query: 209 VAVVFDHDGFCFGNMPQSPTQKFMAKGHTFRHTLYPSYKSNRPPTPDTIVQGLQYLKASI 30
           VAVVFDHDG  +G    S T    AKG  FRHTLYP+YKSNRPPTPDTIVQGLQYLKASI
Sbjct: 152 VAVVFDHDGVPYGTTSNSSTGYRSAKGMNFRHTLYPAYKSNRPPTPDTIVQGLQYLKASI 211

Query: 29  KAMSIKVIE 3
           KAMSIKVIE
Sbjct: 212 KAMSIKVIE 220


>ref|XP_002876121.1| hypothetical protein ARALYDRAFT_485561 [Arabidopsis lyrata subsp.
           lyrata] gi|297321959|gb|EFH52380.1| hypothetical protein
           ARALYDRAFT_485561 [Arabidopsis lyrata subsp. lyrata]
          Length = 454

 Score =  206 bits (523), Expect = 2e-51
 Identities = 102/129 (79%), Positives = 111/129 (86%)
 Frame = -2

Query: 389 SNGRVMLIDGTSIIYRSYYKLLANLHHGHLSNADGNGDWVLTISKALSLIIDVLEFTPSH 210
           SNGRVMLIDGTSIIYR+YYKLLA L+HGHL++ADGN DWVLTI  +LSL+IDVL+F PSH
Sbjct: 121 SNGRVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWVLTIFSSLSLLIDVLKFLPSH 180

Query: 209 VAVVFDHDGFCFGNMPQSPTQKFMAKGHTFRHTLYPSYKSNRPPTPDTIVQGLQYLKASI 30
           VAVVFDHDG  +G    S T    AKG  FRHTLYP+YKSNRPPTPDTIVQGLQYLKASI
Sbjct: 181 VAVVFDHDGVPYGTTSNSSTGYRSAKGMNFRHTLYPAYKSNRPPTPDTIVQGLQYLKASI 240

Query: 29  KAMSIKVIE 3
           KAMSIKVIE
Sbjct: 241 KAMSIKVIE 249


>ref|NP_001078270.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
           gi|332645360|gb|AEE78881.1| 5'-3' exonuclease-like
           protein [Arabidopsis thaliana]
          Length = 448

 Score =  206 bits (523), Expect = 2e-51
 Identities = 102/129 (79%), Positives = 111/129 (86%)
 Frame = -2

Query: 389 SNGRVMLIDGTSIIYRSYYKLLANLHHGHLSNADGNGDWVLTISKALSLIIDVLEFTPSH 210
           SNGRVMLIDGTSIIYR+YYKLLA L+HGHL++ADGN DWVLTI  +LSL+IDVL+F PSH
Sbjct: 115 SNGRVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWVLTIFSSLSLLIDVLKFLPSH 174

Query: 209 VAVVFDHDGFCFGNMPQSPTQKFMAKGHTFRHTLYPSYKSNRPPTPDTIVQGLQYLKASI 30
           VAVVFDHDG  +G    S T    AKG  FRHTLYP+YKSNRPPTPDTIVQGLQYLKASI
Sbjct: 175 VAVVFDHDGVPYGTTSNSSTGYRSAKGMNFRHTLYPAYKSNRPPTPDTIVQGLQYLKASI 234

Query: 29  KAMSIKVIE 3
           KAMSIKVIE
Sbjct: 235 KAMSIKVIE 243


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