BLASTX nr result

ID: Atractylodes22_contig00028653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028653
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518086.1| conserved hypothetical protein [Ricinus comm...   152   3e-35
ref|XP_003601616.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   147   9e-34
ref|XP_002300170.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
ref|XP_003552761.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   140   8e-32
ref|XP_003537512.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   140   8e-32

>ref|XP_002518086.1| conserved hypothetical protein [Ricinus communis]
            gi|223542682|gb|EEF44219.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1006

 Score =  152 bits (384), Expect = 3e-35
 Identities = 73/107 (68%), Positives = 86/107 (80%), Gaps = 7/107 (6%)
 Frame = -3

Query: 505  DARGRLSKLNGHIDFNDTIDLKPYMDPSCCRDRGTCRYRLIGVVEHIGTMRGGHYVAYVR 326
            DARGRLSKLNGH++F D +DL+PYMDP C  DR    YRL+GVVEH+GTMRGGHYVAYVR
Sbjct: 901  DARGRLSKLNGHVNFGDVLDLRPYMDPRCT-DREKYVYRLLGVVEHLGTMRGGHYVAYVR 959

Query: 325  GGAKG-------NDDCLWYHASDAHVREVSLEQVLRCEAYVLFYEQM 206
            GG K        +   +WYHASDA+VREVSLE+VLRCEAY+LFYE++
Sbjct: 960  GGQKSKGKAENESGSSVWYHASDAYVREVSLEEVLRCEAYILFYEKI 1006


>ref|XP_003601616.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
            gi|355490664|gb|AES71867.1| Ubiquitin carboxyl-terminal
            hydrolase [Medicago truncatula]
          Length = 1070

 Score =  147 bits (371), Expect = 9e-34
 Identities = 69/107 (64%), Positives = 85/107 (79%), Gaps = 8/107 (7%)
 Frame = -3

Query: 505  DARGRLSKLNGHIDFNDTIDLKPYMDPSCCRDRGTCRYRLIGVVEHIGTMRGGHYVAYVR 326
            DARGRLSKLNGH++F +T+DL+PYMDP C  +    +Y+L+GVVEH GTMRGGHYVAYVR
Sbjct: 964  DARGRLSKLNGHVNFRETMDLRPYMDPRCINEE-EYKYQLVGVVEHSGTMRGGHYVAYVR 1022

Query: 325  GGA--------KGNDDCLWYHASDAHVREVSLEQVLRCEAYVLFYEQ 209
            GG         K N+   WYHASDA+VR+VSL++VLRCEAY+LFYE+
Sbjct: 1023 GGQRNREKVDNKENESSTWYHASDAYVRQVSLDEVLRCEAYILFYER 1069


>ref|XP_002300170.1| predicted protein [Populus trichocarpa] gi|222847428|gb|EEE84975.1|
            predicted protein [Populus trichocarpa]
          Length = 925

 Score =  145 bits (365), Expect = 4e-33
 Identities = 69/107 (64%), Positives = 85/107 (79%), Gaps = 7/107 (6%)
 Frame = -3

Query: 505  DARGRLSKLNGHIDFNDTIDLKPYMDPSCCRDRGTCRYRLIGVVEHIGTMRGGHYVAYVR 326
            DARGRLSKLNGH++F D +DL+PYMDP C  D  +  YRL+GVVEH GTMRGGHY+AYVR
Sbjct: 818  DARGRLSKLNGHVNFRDVLDLRPYMDPRCV-DTQSYVYRLLGVVEHSGTMRGGHYIAYVR 876

Query: 325  GGAKG-------NDDCLWYHASDAHVREVSLEQVLRCEAYVLFYEQM 206
            G A+G           +WY+ASDAHV+EVSLE+VLRC+AY+LFYE++
Sbjct: 877  GDARGKGRADKEQGGSVWYYASDAHVQEVSLEEVLRCDAYLLFYEKI 923


>ref|XP_003552761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Glycine max]
          Length = 980

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/107 (61%), Positives = 83/107 (77%), Gaps = 7/107 (6%)
 Frame = -3

Query: 505  DARGRLSKLNGHIDFNDTIDLKPYMDPSCCRDRGTCRYRLIGVVEHIGTMRGGHYVAYVR 326
            DARGRLSKLNGH++F +T+D++PY+DP C  +     Y L+G+VEH GTMRGGHYVAYVR
Sbjct: 875  DARGRLSKLNGHVNFRETMDIRPYIDPRCINEEKYA-YHLVGLVEHSGTMRGGHYVAYVR 933

Query: 325  GGA-------KGNDDCLWYHASDAHVREVSLEQVLRCEAYVLFYEQM 206
            GG        K N+   WY ASDA+VREVSL++VLRCEAY+LFYE++
Sbjct: 934  GGQRNCGKGDKENEGSTWYQASDAYVREVSLDEVLRCEAYILFYEKI 980


>ref|XP_003537512.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Glycine max]
          Length = 1052

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/108 (61%), Positives = 83/108 (76%), Gaps = 8/108 (7%)
 Frame = -3

Query: 505  DARGRLSKLNGHIDFNDTIDLKPYMDPSCCRDRGTCRYRLIGVVEHIGTMRGGHYVAYVR 326
            DARGRLSKLNGH++F +T+D++PY+DP C  +     Y L+G+VEH GTMRGGHYVAYVR
Sbjct: 946  DARGRLSKLNGHVNFRETMDIRPYIDPRCINEE-KYEYHLVGLVEHSGTMRGGHYVAYVR 1004

Query: 325  GGA--------KGNDDCLWYHASDAHVREVSLEQVLRCEAYVLFYEQM 206
            GG         K N+   WY ASDA+VREVSL++VLRCEAY+LFYE++
Sbjct: 1005 GGQRNSGKGGDKENEGSTWYQASDAYVREVSLDEVLRCEAYILFYEKI 1052


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