BLASTX nr result

ID: Atractylodes22_contig00028554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028554
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group...    64   2e-08
gb|ABA95676.1| retrotransposon protein, putative, unclassified [...    63   2e-08
gb|EEC71158.1| hypothetical protein OsI_02999 [Oryza sativa Indi...    63   2e-08
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]      62   4e-08
gb|ABA94365.1| retrotransposon protein, putative, unclassified [...    61   8e-08

>gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108709048|gb|ABF96843.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 594

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/88 (36%), Positives = 50/88 (56%)
 Frame = -1

Query: 267 TQGSMSVTAFCDAIKKIFDALKSIGEVILDSDLVLQTLRGLNPSFNMFVLNVENSDVQPS 88
           TQG +SV  +C  +K   DAL+ +   + +S LVL  LRG+N  F     N+ ++ V PS
Sbjct: 143 TQGDLSVADYCQRMKTAADALRDVSHPVTESQLVLNLLRGVNSRFTSTADNIASAPVLPS 202

Query: 87  FMQLRSRLLLYEKRMSQQIEGVPVSAMV 4
           F   R+ L+L E R +  ++  P +A+V
Sbjct: 203 FASARNTLVLKELRNANSVQVQPETALV 230


>gb|ABA95676.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 215

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/88 (36%), Positives = 50/88 (56%)
 Frame = -1

Query: 267 TQGSMSVTAFCDAIKKIFDALKSIGEVILDSDLVLQTLRGLNPSFNMFVLNVENSDVQPS 88
           TQG +SV  +C  +K + DAL  +G  + +S LVL  LRG+N  F     N+ ++ V PS
Sbjct: 37  TQGDLSVADYCQRMKTVADALHDVGHPVTESQLVLNLLRGVNSRFTSTADNIASAPVLPS 96

Query: 87  FMQLRSRLLLYEKRMSQQIEGVPVSAMV 4
           F   R+ L+L E R +  ++    +A+V
Sbjct: 97  FASARNTLVLKELRNANSVQVQSETALV 124


>gb|EEC71158.1| hypothetical protein OsI_02999 [Oryza sativa Indica Group]
          Length = 326

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/87 (40%), Positives = 47/87 (54%)
 Frame = -1

Query: 264 QGSMSVTAFCDAIKKIFDALKSIGEVILDSDLVLQTLRGLNPSFNMFVLNVENSDVQPSF 85
           QG  S+  +C  +K    AL+ +G  I DS LVL  LRGLNP +     ++ NS V PSF
Sbjct: 145 QGDSSIDEYCQRLKIKAAALRDVGHTIEDSQLVLSLLRGLNPRYTATADDIANSTVLPSF 204

Query: 84  MQLRSRLLLYEKRMSQQIEGVPVSAMV 4
            + R  L L E R++   +    SAMV
Sbjct: 205 SRAREMLSLKELRLANDEKTTAASAMV 231


>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1480

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/88 (36%), Positives = 50/88 (56%)
 Frame = -1

Query: 267 TQGSMSVTAFCDAIKKIFDALKSIGEVILDSDLVLQTLRGLNPSFNMFVLNVENSDVQPS 88
           TQG++ +  +C  +K   DAL+ +G  + +S LVL  L GLN  F+    N+  + V PS
Sbjct: 138 TQGNLPIADYCQKVKTAVDALRDVGHPVSESQLVLNLLSGLNSRFSSTADNIAGAPVLPS 197

Query: 87  FMQLRSRLLLYEKRMSQQIEGVPVSAMV 4
           F   R+ LLL E R++ + +    +AMV
Sbjct: 198 FASARNTLLLKELRLANEHKVQAETAMV 225


>gb|ABA94365.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1064

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/76 (39%), Positives = 44/76 (57%)
 Frame = -1

Query: 267 TQGSMSVTAFCDAIKKIFDALKSIGEVILDSDLVLQTLRGLNPSFNMFVLNVENSDVQPS 88
           TQG M +  +C  +K   DAL+ +G  + +S LVL  L GLN  F+    N+ ++ V PS
Sbjct: 141 TQGDMPIAIYCQKVKTAADALRDVGHPVTESQLVLNLLSGLNSRFSSTADNITSAPVLPS 200

Query: 87  FMQLRSRLLLYEKRMS 40
           F   R+ LLL E R++
Sbjct: 201 FTSARNTLLLKELRVA 216


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