BLASTX nr result

ID: Atractylodes22_contig00028543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028543
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597796.1| DNA repair protein XRCC1 [Medicago truncatul...    68   1e-09
ref|XP_002280451.2| PREDICTED: uncharacterized protein LOC100266...    67   2e-09
ref|XP_002517520.1| DNA-repair protein xrcc1, putative [Ricinus ...    63   4e-08
ref|NP_001241945.1| uncharacterized protein LOC100818448 [Glycin...    61   1e-07
ref|XP_002299631.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_003597796.1| DNA repair protein XRCC1 [Medicago truncatula]
           gi|355486844|gb|AES68047.1| DNA repair protein XRCC1
           [Medicago truncatula]
          Length = 553

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 31/55 (56%), Positives = 40/55 (72%)
 Frame = -3

Query: 579 MGKIIEDWNFVPRVVEELNKLDIAGNNPVSTSKKDIYHQAITCKHIYEVELGNLE 415
           +G+  EDW F+PRVVEEL +L + GNN  S SK+DI+ QA+ CK IYE EL  L+
Sbjct: 253 IGRGTEDWKFLPRVVEELARLYVVGNNKASMSKEDIHKQALDCKRIYEEELNRLD 307


>ref|XP_002280451.2| PREDICTED: uncharacterized protein LOC100266851 [Vitis vinifera]
          Length = 389

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
 Frame = -3

Query: 573 KIIEDWNFVPRVVEELNKLDIAGNNPVSTSKKDIYHQAITCKHIYEVELGNLEG------ 412
           ++ ++WNF+PRVVEEL KL+   N+  S SK D+Y  AITCK IYE E  +L+       
Sbjct: 278 EMTKEWNFIPRVVEELVKLESTRNSHSSLSKADLYKHAITCKEIYEAEFSSLDDDALANK 337

Query: 411 XXXXXXXXXXXXXXXXXKPTXXXXXXXXXDTIEMTEDEVREAFNGVASSM 262
                              +         +T+EMTE+E+  A+N VAS++
Sbjct: 338 KQPKTGRGEKGKKKMTKATSSNAAGYDSDETVEMTEEEIDLAYNTVASAI 387


>ref|XP_002517520.1| DNA-repair protein xrcc1, putative [Ricinus communis]
           gi|223543152|gb|EEF44684.1| DNA-repair protein xrcc1,
           putative [Ricinus communis]
          Length = 379

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
 Frame = -3

Query: 573 KIIEDWNFVPRVVEELNKLDIAGNNPVSTSKKDIYHQAITCKHIYEVELGNL-EGXXXXX 397
           KI+E WN VP  VEEL KL  AGN+    SK+D+  QA   K IYE EL N+ +      
Sbjct: 273 KIVEQWNIVPHAVEELIKLVDAGNSAACLSKEDLCKQAKAFKQIYEAELSNVNDDSKLKT 332

Query: 396 XXXXXXXXXXXXKPTXXXXXXXXXDTIEMTEDEVREAFNGVASSM 262
                                   +T+EMTE+E+  A+N VAS +
Sbjct: 333 KRLKNDENESGGNGRSNGADYDSDETVEMTEEEIDLAYNNVASKL 377


>ref|NP_001241945.1| uncharacterized protein LOC100818448 [Glycine max]
           gi|255638851|gb|ACU19729.1| unknown [Glycine max]
          Length = 382

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
 Frame = -3

Query: 564 EDWNFVPRVVEELNKLDIAGNNPVSTSKKDIYHQAITCKHIYEVELGNLEGXXXXXXXXX 385
           EDW F+PRVVEEL K D+ GN   S SK+D+  QA+ CK IYE EL +L+          
Sbjct: 277 EDWMFLPRVVEELAKFDVVGNKG-SLSKEDLRRQALDCKRIYEEELNSLDHERKKNSKVN 335

Query: 384 XXXXXXXXKP---TXXXXXXXXXDTIEMTEDEVREAFNGVASSM 262
                   +    +         +TIEMTE E+  A+  ++S++
Sbjct: 336 KEQRSKTGRTNAMSSGAVEYDSDETIEMTEQEIDIAYKALSSNI 379


>ref|XP_002299631.1| predicted protein [Populus trichocarpa] gi|222846889|gb|EEE84436.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 40/102 (39%), Positives = 51/102 (50%)
 Frame = -3

Query: 573 KIIEDWNFVPRVVEELNKLDIAGNNPVSTSKKDIYHQAITCKHIYEVELGNLEGXXXXXX 394
           KI + WN VP  VEE+ KL   GN   S SK+D+  +A  CK IYE EL +L+G      
Sbjct: 248 KITDQWNVVPHAVEEMVKLVDGGNASSSLSKEDLCRKAKACKEIYEAELSSLDG------ 301

Query: 393 XXXXXXXXXXXKPTXXXXXXXXXDTIEMTEDEVREAFNGVAS 268
                      K           +TIEMT++EV  A+N VAS
Sbjct: 302 --------SKSKKQRLKTEYDSDETIEMTKEEVDMAYNTVAS 335


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